RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 BECN1Q14457 450 aa22.49■■□□□ 1.19
HSPG2-205ENST00000427897 CMASQ8NFW8 434 aaPredicted RBP22.49■■□□□ 1.19
HSPG2-205ENST00000427897 POMGNT1Q8WZA1 660 aa22.49■■□□□ 1.19
HSPG2-205ENST00000427897 SMG7Q92540 1137 aaKnown RBP22.49■■□□□ 1.19
HSPG2-205ENST00000427897 STAMQ92783 540 aa22.49■■□□□ 1.19
HSPG2-205ENST00000427897 EDAQ92838 391 aa22.49■■□□□ 1.19
HSPG2-205ENST00000427897 ACCSQ96QU6 501 aa22.49■■□□□ 1.19
HSPG2-205ENST00000427897 CLSTN3Q9BQT9 956 aa22.49■■□□□ 1.19
HSPG2-205ENST00000427897 CUEDC2Q9H467 287 aa22.49■■□□□ 1.19
HSPG2-205ENST00000427897 ZDHHC7Q9NXF8 308 aa22.49■■□□□ 1.19
HSPG2-205ENST00000427897 UBQLN1Q9UMX0 589 aaKnown RBP22.49■■□□□ 1.19
HSPG2-205ENST00000427897 A0A087X0B3 334 aa22.48■■□□□ 1.19
HSPG2-205ENST00000427897 A0A0B4J269 797 aa22.48■■□□□ 1.19
HSPG2-205ENST00000427897 LACTBL1A8MY62 500 aa22.48■■□□□ 1.19
HSPG2-205ENST00000427897 PRR33A8MZF0 331 aa22.48■■□□□ 1.19
HSPG2-205ENST00000427897 C2CD4DB7Z1M9 353 aa22.48■■□□□ 1.19
HSPG2-205ENST00000427897 RFPL2O75678 378 aa22.48■■□□□ 1.19
HSPG2-205ENST00000427897 TKTP29401 623 aaKnown RBP22.48■■□□□ 1.19
HSPG2-205ENST00000427897 OR1D2P34982 312 aa22.48■■□□□ 1.19
HSPG2-205ENST00000427897 POSTNQ15063 836 aa22.48■■□□□ 1.19
HSPG2-205ENST00000427897 STXBP4Q6ZWJ1 553 aa22.48■■□□□ 1.19
HSPG2-205ENST00000427897 OTOP3Q7RTS5 596 aa22.48■■□□□ 1.19
HSPG2-205ENST00000427897 CD302Q8IX05 232 aa22.48■■□□□ 1.19
HSPG2-205ENST00000427897 DNAJC19Q96DA6 116 aa22.48■■□□□ 1.19
HSPG2-205ENST00000427897 TSPAN18Q96SJ8 248 aa22.48■■□□□ 1.19
HSPG2-205ENST00000427897 FIZ1Q96SL8 496 aa22.48■■□□□ 1.19
HSPG2-205ENST00000427897 AGO2Q9UKV8 859 aaKnown RBP22.48■■□□□ 1.19
HSPG2-205ENST00000427897 MUC3AQ02505 3323 aa22.47■■□□□ 1.19
HSPG2-205ENST00000427897 TTC26A0AVF1 554 aa22.47■■□□□ 1.19
HSPG2-205ENST00000427897 ANKRD63C9JTQ0 380 aa22.47■■□□□ 1.19
HSPG2-205ENST00000427897 H7C4K7 107 aa22.47■■□□□ 1.19
HSPG2-205ENST00000427897 ALCAMQ13740 583 aa22.47■■□□□ 1.19
HSPG2-205ENST00000427897 PPM1LQ5SGD2 360 aa22.47■■□□□ 1.19
HSPG2-205ENST00000427897 LILRA6Q6PI73 481 aa22.47■■□□□ 1.19
HSPG2-205ENST00000427897 C3orf58Q8NDZ4 430 aa22.47■■□□□ 1.19
HSPG2-205ENST00000427897 BEST2Q8NFU1 509 aa22.47■■□□□ 1.19
HSPG2-205ENST00000427897 TNMDQ9H2S6 317 aa22.47■■□□□ 1.19
HSPG2-205ENST00000427897 TUBGCP4Q9UGJ1 667 aa22.47■■□□□ 1.19
HSPG2-205ENST00000427897 USTQ9Y2C2 406 aa22.47■■□□□ 1.19
HSPG2-205ENST00000427897 CDY1Q9Y6F8 540 aa22.47■■□□□ 1.19
HSPG2-205ENST00000427897 BDP1A6H8Y1 2624 aa22.46■■□□□ 1.19
HSPG2-205ENST00000427897 IGFBP6P24592 240 aaPredicted RBP22.46■■□□□ 1.19
HSPG2-205ENST00000427897 GBP2P32456 591 aaPredicted RBP22.46■■□□□ 1.19
HSPG2-205ENST00000427897 ELF1P32519 619 aa22.46■■□□□ 1.19
HSPG2-205ENST00000427897 ACOT2P49753 483 aa22.46■■□□□ 1.19
HSPG2-205ENST00000427897 ARPP19P56211 112 aa22.46■■□□□ 1.19
HSPG2-205ENST00000427897 DNM1Q05193 864 aaKnown RBP22.46■■□□□ 1.19
HSPG2-205ENST00000427897 PKP1Q13835 747 aa22.46■■□□□ 1.19
HSPG2-205ENST00000427897 ENOX2Q16206 610 aaKnown RBP22.46■■□□□ 1.19
HSPG2-205ENST00000427897 PTPN21Q16825 1174 aa22.46■■□□□ 1.19
HSPG2-205ENST00000427897 APPL2Q8NEU8 664 aa22.46■■□□□ 1.19
HSPG2-205ENST00000427897 NOC3LQ8WTT2 800 aaKnown RBP22.46■■□□□ 1.19
HSPG2-205ENST00000427897 MTRRQ9UBK8 725 aa22.46■■□□□ 1.19
HSPG2-205ENST00000427897 LIMD1Q9UGP4 676 aa22.46■■□□□ 1.19
HSPG2-205ENST00000427897 POLIQ9UNA4 740 aa22.46■■□□□ 1.19
HSPG2-205ENST00000427897 HCN4Q9Y3Q4 1203 aa22.46■■□□□ 1.19
HSPG2-205ENST00000427897 MTCL1Q9Y4B5 1905 aaKnown RBP22.45■■□□□ 1.18
HSPG2-205ENST00000427897 NCOR1O75376 2440 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 SYN3O14994 580 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 POLR2DO15514 142 aaKnown RBP22.45■■□□□ 1.18
HSPG2-205ENST00000427897 ZMYND10O75800 440 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 CYP3A5P20815 502 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 ZXDAP98168 799 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 RAB33AQ14088 237 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 VARS2Q5ST30 1063 aaKnown RBP22.45■■□□□ 1.18
HSPG2-205ENST00000427897 ZBTB41Q5SVQ8 909 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 L1TD1Q5T7N2 865 aaKnown RBP22.45■■□□□ 1.18
HSPG2-205ENST00000427897 SLC39A4Q6P5W5 647 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 SHC4Q6S5L8 630 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 DSTYKQ6XUX3 929 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 ZDHHC14Q8IZN3 488 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 PRKD2Q9BZL6 878 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 OLFML3Q9NRN5 406 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 CPSF3Q9UKF6 684 aaKnown RBP22.45■■□□□ 1.18
HSPG2-205ENST00000427897 PCDHA7Q9UN72 937 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 BACE2Q9Y5Z0 518 aa22.45■■□□□ 1.18
HSPG2-205ENST00000427897 XYLBO75191 536 aa22.44■■□□□ 1.18
HSPG2-205ENST00000427897 C8AP07357 584 aa22.44■■□□□ 1.18
HSPG2-205ENST00000427897 ASIC1P78348 528 aa22.44■■□□□ 1.18
HSPG2-205ENST00000427897 AXDND1Q5T1B0 1012 aaPredicted RBP22.44■■□□□ 1.18
HSPG2-205ENST00000427897 JADE1Q6IE81 842 aa22.44■■□□□ 1.18
HSPG2-205ENST00000427897 CD300LGQ6UXG3 332 aa22.44■■□□□ 1.18
HSPG2-205ENST00000427897 SUSD3Q96L08 255 aa22.44■■□□□ 1.18
HSPG2-205ENST00000427897 PYM1Q9BRP8 204 aaKnown RBP22.44■■□□□ 1.18
HSPG2-205ENST00000427897 TMEM206Q9H813 350 aa22.44■■□□□ 1.18
HSPG2-205ENST00000427897 WDR6Q9NNW5 1121 aaKnown RBP22.44■■□□□ 1.18
HSPG2-205ENST00000427897 C11orf16Q9NQ32 467 aa22.44■■□□□ 1.18
HSPG2-205ENST00000427897 FBXW11Q9UKB1 542 aa22.44■■□□□ 1.18
HSPG2-205ENST00000427897 CLUHO75153 1309 aa22.43■■□□□ 1.18
HSPG2-205ENST00000427897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.43■■□□□ 1.18
HSPG2-205ENST00000427897 TISP43B9A030 160 aa22.43■■□□□ 1.18
HSPG2-205ENST00000427897 MEFVO15553 781 aaPredicted RBP22.43■■□□□ 1.18
HSPG2-205ENST00000427897 ADAM12O43184 909 aa22.43■■□□□ 1.18
HSPG2-205ENST00000427897 LDHAP00338 332 aaKnown RBP22.43■■□□□ 1.18
HSPG2-205ENST00000427897 HNRNPA1P09651 372 aaKnown RBP eCLIP22.43■■□□□ 1.18
HSPG2-205ENST00000427897 TMEM132DQ14C87 1099 aa22.43■■□□□ 1.18
HSPG2-205ENST00000427897 CTXN3Q4LDR2 81 aa22.43■■□□□ 1.18
HSPG2-205ENST00000427897 TRIM67Q6ZTA4 783 aa22.43■■□□□ 1.18
HSPG2-205ENST00000427897 USP37Q86T82 979 aa22.43■■□□□ 1.18
HSPG2-205ENST00000427897 CEP57L1Q8IYX8 460 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms