RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 TCHPQ9BT92 498 aa17.68■□□□□ 0.42
DDR1-234ENST00000424544 NPHP3-ACAD11A0A0J9YXS1 232 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 KRBA1A5PL33 1030 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 PROB1E7EW31 1015 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 I3L4J1 428 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 ADRB2P07550 413 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 SRFP11831 508 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 AOC1P19801 751 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 FSHRP23945 695 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 ZNF131P52739 623 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 SMTNP53814 917 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 NCKAP1LP55160 1127 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 RAD51AP2Q09MP3 1159 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 HTR4Q13639 388 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 ZRSR1Q15695 479 aaKnown RBP17.67■□□□□ 0.42
DDR1-234ENST00000424544 ANKS3Q6ZW76 656 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 GRASPQ7Z6J2 395 aaPredicted RBP17.67■□□□□ 0.42
DDR1-234ENST00000424544 ZNF461Q8TAF7 563 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 CDY1Q9Y6F8 540 aa17.67■□□□□ 0.42
DDR1-234ENST00000424544 H0Y858 1186 aa17.66■□□□□ 0.42
DDR1-234ENST00000424544 PODXLO00592 558 aa17.66■□□□□ 0.42
DDR1-234ENST00000424544 SYN3O14994 580 aa17.66■□□□□ 0.42
DDR1-234ENST00000424544 NTHL1P78549 312 aa17.66■□□□□ 0.42
DDR1-234ENST00000424544 GRIN1Q05586 938 aa17.66■□□□□ 0.42
DDR1-234ENST00000424544 PPM1LQ5SGD2 360 aa17.66■□□□□ 0.42
DDR1-234ENST00000424544 LIN9Q5TKA1 542 aa17.66■□□□□ 0.42
DDR1-234ENST00000424544 FAM173BQ6P4H8 233 aa17.66■□□□□ 0.42
DDR1-234ENST00000424544 C18orf25Q96B23 403 aaPredicted RBP17.66■□□□□ 0.42
DDR1-234ENST00000424544 ZNF396Q96N95 335 aaPredicted RBP17.66■□□□□ 0.42
DDR1-234ENST00000424544 FIZ1Q96SL8 496 aa17.66■□□□□ 0.42
DDR1-234ENST00000424544 RPP25Q9BUL9 199 aaKnown RBP17.66■□□□□ 0.42
DDR1-234ENST00000424544 PLEKHA5Q9HAU0 1116 aa17.66■□□□□ 0.42
DDR1-234ENST00000424544 SLC2A4RGQ9NR83 387 aa17.66■□□□□ 0.42
DDR1-234ENST00000424544 LARSQ9P2J5 1176 aaKnown RBP17.66■□□□□ 0.42
DDR1-234ENST00000424544 DNMT3BQ9UBC3 853 aaKnown RBP17.66■□□□□ 0.42
DDR1-234ENST00000424544 CDH7Q9ULB5 785 aa17.66■□□□□ 0.42
DDR1-234ENST00000424544 ODF2LQ9ULJ1 636 aa17.66■□□□□ 0.42
DDR1-234ENST00000424544 CFAP54Q96N23 3096 aa17.66■□□□□ 0.42
DDR1-234ENST00000424544 CITO14578 2027 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 TTC26A0AVF1 554 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 ARHGEF37A1IGU5 675 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 CCL16O15467 120 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 CLDN3O15551 220 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 FAM189A1O60320 539 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 BMP15O95972 392 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 PIGRP01833 764 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 STRN3Q13033 797 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 NOLC1Q14978 699 aaKnown RBP eCLIP17.65■□□□□ 0.42
DDR1-234ENST00000424544 FOXD4L6Q3SYB3 417 aaPredicted RBP17.65■□□□□ 0.42
DDR1-234ENST00000424544 VARS2Q5ST30 1063 aaKnown RBP17.65■□□□□ 0.42
DDR1-234ENST00000424544 ATL3Q6DD88 541 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 POTEHQ6S545 545 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 FOXD4L3Q6VB84 417 aaPredicted RBP17.65■□□□□ 0.42
DDR1-234ENST00000424544 GET4Q7L5D6 327 aaPredicted RBP17.65■□□□□ 0.42
DDR1-234ENST00000424544 HAUS6Q7Z4H7 955 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 SIX5Q8N196 739 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 ITFG1Q8TB96 612 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 SLC7A14Q8TBB6 771 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 FGF13Q92913 245 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 FGF14Q92915 247 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 SUSD3Q96L08 255 aa17.65■□□□□ 0.42
DDR1-234ENST00000424544 AVENQ9NQS1 362 aaPredicted RBP17.65■□□□□ 0.42
DDR1-234ENST00000424544 RIF1Q5UIP0 2472 aaKnown RBP17.65■□□□□ 0.42
DDR1-234ENST00000424544 PTPRZ1P23471 2315 aaPredicted RBP17.65■□□□□ 0.42
DDR1-234ENST00000424544 MYH11P35749 1972 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 SCP2P22307 547 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 LRPAP1P30533 357 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 LONP1P36776 959 aaKnown RBP17.64■□□□□ 0.41
DDR1-234ENST00000424544 UBA7P41226 1012 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 ROR1Q01973 937 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 SEZ6Q53EL9 994 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 PARM1Q6UWI2 310 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 ATOH1Q92858 354 aaPredicted RBP17.64■□□□□ 0.41
DDR1-234ENST00000424544 CDK5RAP3Q96JB5 506 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 RTP3Q9BQQ7 232 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 REEP2Q9BRK0 252 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 CCSER1Q9C0I3 900 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 MFSD1Q9H3U5 465 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 FAM86C1Q9NVL1 165 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 KCNH3Q9ULD8 1083 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 NUMBLQ9Y6R0 609 aa17.64■□□□□ 0.41
DDR1-234ENST00000424544 WDR27A2RRH5 827 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 H0YCG3 227 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 XYLBO75191 536 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 CFHP08603 1231 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 CLTAP09496 248 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 ATF2P15336 505 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 CYP3A5P20815 502 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 NBL1P41271 181 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 CACNB1Q02641 598 aaPredicted RBP17.63■□□□□ 0.41
DDR1-234ENST00000424544 PTPAQ15257 358 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 SF3A1Q15459 793 aaKnown RBP17.63■□□□□ 0.41
DDR1-234ENST00000424544 PHLDB3Q6NSJ2 640 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 CCDC105Q8IYK2 499 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 TCEAL8Q8IYN2 117 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 FLCNQ8NFG4 579 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 GPR152Q8TDT2 470 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 CALML4Q96GE6 196 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 HCFC1R1Q9NWW0 138 aa17.63■□□□□ 0.41
DDR1-234ENST00000424544 TFIP11Q9UBB9 837 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms