RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 MRPS25P82663 173 aaKnown RBP10.39□□□□□ -0.75
USP54-205ENST00000424265 LRRC63Q05C16 580 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 WDR44Q5JSH3 913 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 SPATA1Q5VX52 437 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 GABPB2Q8TAK5 448 aaPredicted RBP10.39□□□□□ -0.75
USP54-205ENST00000424265 CEP295NLQ96MC4 621 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 KMT5AQ9NQR1 393 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 IL1RAPL1Q9NZN1 696 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 KIAA0391O15091 583 aaKnown RBP10.39□□□□□ -0.75
USP54-205ENST00000424265 CYTH3O43739 400 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 RPA1P27694 616 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 LRRC8BQ6P9F7 803 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 EEPD1Q7L9B9 569 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 FMR1NBQ8N0W7 255 aaPredicted RBP10.39□□□□□ -0.75
USP54-205ENST00000424265 ABRAQ8N0Z2 381 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 KIF2BQ8N4N8 673 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 OR6J1Q8NGC5 347 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 GDAP1Q8TB36 358 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 LXNQ9BS40 222 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 BLZF1Q9H2G9 400 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 TXLNGQ9NUQ3 528 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 LRCH1Q9Y2L9 728 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 ASB3Q9Y575 518 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 PCDHA5Q9Y5H7 936 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 A0A1W2PRG0 241 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 KYAT1Q16773 422 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 C6orf163Q5TEZ5 329 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 PACS1Q6VY07 963 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 PATL1Q86TB9 770 aaKnown RBP10.39□□□□□ -0.75
USP54-205ENST00000424265 VMP1Q96GC9 406 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 TEPSINQ96N21 525 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 KCNH7Q9NS40 1196 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 BIRC5O15392 142 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 DGAT1O75907 488 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 TSPAN9O75954 239 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 GGPS1O95749 300 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 RASSF2P50749 326 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 FUT2Q10981 343 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 CNGA3Q16281 694 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 LRRC49Q8IUZ0 686 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 CCDC42Q96M95 316 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 NOC4LQ9BVI4 516 aaKnown RBP10.39□□□□□ -0.75
USP54-205ENST00000424265 NMRK2Q9NPI5 230 aa10.39□□□□□ -0.75
USP54-205ENST00000424265 RRN3P2A6NIE6 340 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 ATP9AO75110 1047 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 STAT5BP51692 787 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 CSE1LP55060 971 aaKnown RBP10.38□□□□□ -0.75
USP54-205ENST00000424265 ITIH4Q14624 930 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 LBX2Q6XYB7 198 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 STKLD1Q8NE28 680 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 CCDC51Q96ER9 411 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 MMS19Q96T76 1030 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 KIAA1586Q9HCI6 787 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 SPO11Q9Y5K1 396 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 NAV1Q8NEY1 1877 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 UBE4BO95155 1302 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 POTEMA6NI47 508 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 LRRC10BA6NIK2 292 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 TEX28O15482 410 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 ASAP2O43150 1006 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 CA12O43570 354 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 DDHD2O94830 711 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 PRMT2P55345 433 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 PADI6Q6TGC4 694 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 SYT15Q9BQS2 421 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 NFE2L3Q9Y4A8 694 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 NRXN2Q9P2S2 1712 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 CYP3A7-CYP3A51PA0A087WV96 503 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 CYP3A7P24462 503 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 EEF1GP26641 437 aaKnown RBP10.38□□□□□ -0.75
USP54-205ENST00000424265 MAP3K7CLP57077 242 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 DCTN2Q13561 401 aaKnown RBP10.38□□□□□ -0.75
USP54-205ENST00000424265 MTMR3Q13615 1198 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 KRT71Q3SY84 523 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 NUF2Q9BZD4 464 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 C17orf75Q9HAS0 396 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 GABBR1Q9UBS5 961 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 LRRIQ4A6NIV6 560 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 AGPSO00116 658 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 RARBP10826 455 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 P4HA1P13674 534 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 ENDOUP21128 410 aaKnown RBP10.38□□□□□ -0.75
USP54-205ENST00000424265 VHLP40337 213 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 PHKA2P46019 1235 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 STX17P56962 302 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 SNRPFP62306 86 aaKnown RBP10.38□□□□□ -0.75
USP54-205ENST00000424265 BIRC3Q13489 604 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 CTTNQ14247 550 aaKnown RBP10.38□□□□□ -0.75
USP54-205ENST00000424265 CNPY1Q3B7I2 92 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 MTERF2Q49AM1 385 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 MTMR8Q96EF0 704 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 TTC1Q99614 292 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 ABHD16BQ9H3Z7 469 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 RWDD2AQ9UIY3 292 aa10.38□□□□□ -0.75
USP54-205ENST00000424265 TIAM2Q8IVF5 1701 aa10.37□□□□□ -0.75
USP54-205ENST00000424265 MYL3P08590 195 aa10.37□□□□□ -0.75
USP54-205ENST00000424265 CCNE1P24864 410 aa10.37□□□□□ -0.75
USP54-205ENST00000424265 CYLC1P35663 651 aaPredicted RBP10.37□□□□□ -0.75
USP54-205ENST00000424265 EIF2B2P49770 351 aaKnown RBP10.37□□□□□ -0.75
USP54-205ENST00000424265 EFNA5P52803 228 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 488.1 ms