RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 CITO14578 2027 aa20.68■□□□□ 0.9
VARS2-202ENST00000421263 SYN3O14994 580 aa20.67■□□□□ 0.9
VARS2-202ENST00000421263 MCL1Q07820 350 aa20.67■□□□□ 0.9
VARS2-202ENST00000421263 VARS2Q5ST30 1063 aaKnown RBP20.67■□□□□ 0.9
VARS2-202ENST00000421263 PHLDB3Q6NSJ2 640 aa20.67■□□□□ 0.9
VARS2-202ENST00000421263 PARM1Q6UWI2 310 aa20.67■□□□□ 0.9
VARS2-202ENST00000421263 DTWD2Q8NBA8 298 aa20.67■□□□□ 0.9
VARS2-202ENST00000421263 ITFG1Q8TB96 612 aa20.67■□□□□ 0.9
VARS2-202ENST00000421263 C18orf25Q96B23 403 aaPredicted RBP20.67■□□□□ 0.9
VARS2-202ENST00000421263 HAPLN2Q9GZV7 340 aa20.67■□□□□ 0.9
VARS2-202ENST00000421263 KCNH3Q9ULD8 1083 aa20.67■□□□□ 0.9
VARS2-202ENST00000421263 MYH11P35749 1972 aa20.66■□□□□ 0.9
VARS2-202ENST00000421263 NPHP3-ACAD11A0A0J9YXS1 232 aa20.66■□□□□ 0.9
VARS2-202ENST00000421263 ARHGEF37A1IGU5 675 aa20.66■□□□□ 0.9
VARS2-202ENST00000421263 NCKAP1LP55160 1127 aa20.66■□□□□ 0.9
VARS2-202ENST00000421263 ROR1Q01973 937 aa20.66■□□□□ 0.9
VARS2-202ENST00000421263 NOLC1Q14978 699 aaKnown RBP eCLIP20.66■□□□□ 0.9
VARS2-202ENST00000421263 CDK5RAP3Q96JB5 506 aa20.66■□□□□ 0.9
VARS2-202ENST00000421263 AVENQ9NQS1 362 aaPredicted RBP20.66■□□□□ 0.9
VARS2-202ENST00000421263 HCFC1R1Q9NWW0 138 aa20.66■□□□□ 0.9
VARS2-202ENST00000421263 LARSQ9P2J5 1176 aaKnown RBP20.66■□□□□ 0.9
VARS2-202ENST00000421263 CA14Q9ULX7 337 aa20.66■□□□□ 0.9
VARS2-202ENST00000421263 POLIQ9UNA4 740 aa20.66■□□□□ 0.9
VARS2-202ENST00000421263 SMC3Q9UQE7 1217 aa20.66■□□□□ 0.9
VARS2-202ENST00000421263 WDR27A2RRH5 827 aa20.65■□□□□ 0.9
VARS2-202ENST00000421263 CLDN3O15551 220 aa20.65■□□□□ 0.9
VARS2-202ENST00000421263 ATF2P15336 505 aa20.65■□□□□ 0.9
VARS2-202ENST00000421263 GPC5P78333 572 aa20.65■□□□□ 0.9
VARS2-202ENST00000421263 SEZ6Q53EL9 994 aa20.65■□□□□ 0.9
VARS2-202ENST00000421263 LARP1BQ659C4 914 aaKnown RBP20.65■□□□□ 0.9
VARS2-202ENST00000421263 MTSS1LQ765P7 747 aa20.65■□□□□ 0.9
VARS2-202ENST00000421263 TCEAL8Q8IYN2 117 aa20.65■□□□□ 0.9
VARS2-202ENST00000421263 ST13P5Q8NFI4 369 aaPredicted RBP20.65■□□□□ 0.9
VARS2-202ENST00000421263 LRRC15Q8TF66 581 aa20.65■□□□□ 0.9
VARS2-202ENST00000421263 SUSD3Q96L08 255 aa20.65■□□□□ 0.9
VARS2-202ENST00000421263 PLEKHA5Q9HAU0 1116 aa20.65■□□□□ 0.9
VARS2-202ENST00000421263 ODF2LQ9ULJ1 636 aa20.65■□□□□ 0.9
VARS2-202ENST00000421263 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.65■□□□□ 0.9
VARS2-202ENST00000421263 H0YCG3 227 aa20.64■□□□□ 0.89
VARS2-202ENST00000421263 H7C4K7 107 aa20.64■□□□□ 0.89
VARS2-202ENST00000421263 HARSP12081 509 aaKnown RBP20.64■□□□□ 0.89
VARS2-202ENST00000421263 STARD6P59095 220 aa20.64■□□□□ 0.89
VARS2-202ENST00000421263 CACNB1Q02641 598 aaPredicted RBP20.64■□□□□ 0.89
VARS2-202ENST00000421263 ZBTB6Q15916 424 aa20.64■□□□□ 0.89
VARS2-202ENST00000421263 PABPC1LQ4VXU2 614 aaKnown RBP20.64■□□□□ 0.89
VARS2-202ENST00000421263 ASCL5Q7RTU5 278 aa20.64■□□□□ 0.89
VARS2-202ENST00000421263 HAUS6Q7Z4H7 955 aa20.64■□□□□ 0.89
VARS2-202ENST00000421263 TBC1D32Q96NH3 1257 aa20.64■□□□□ 0.89
VARS2-202ENST00000421263 TBC1D17Q9HA65 648 aa20.64■□□□□ 0.89
VARS2-202ENST00000421263 UPF2Q9HAU5 1272 aaKnown RBP20.64■□□□□ 0.89
VARS2-202ENST00000421263 ARHGEF3Q9NR81 526 aa20.64■□□□□ 0.89
VARS2-202ENST00000421263 BLOC1S4Q9NUP1 217 aa20.64■□□□□ 0.89
VARS2-202ENST00000421263 DLGAP2Q9P1A6 1054 aa20.64■□□□□ 0.89
VARS2-202ENST00000421263 ANKFY1Q9P2R3 1169 aa20.64■□□□□ 0.89
VARS2-202ENST00000421263 NUB1Q9Y5A7 615 aa20.64■□□□□ 0.89
VARS2-202ENST00000421263 VPS13AQ96RL7 3174 aa20.64■□□□□ 0.89
VARS2-202ENST00000421263 PDCD11Q14690 1871 aaKnown RBP20.63■□□□□ 0.89
VARS2-202ENST00000421263 TTC26A0AVF1 554 aa20.63■□□□□ 0.89
VARS2-202ENST00000421263 STK25O00506 426 aa20.63■□□□□ 0.89
VARS2-202ENST00000421263 CLTAP09496 248 aa20.63■□□□□ 0.89
VARS2-202ENST00000421263 SCP2P22307 547 aa20.63■□□□□ 0.89
VARS2-202ENST00000421263 LRPAP1P30533 357 aa20.63■□□□□ 0.89
VARS2-202ENST00000421263 UBA7P41226 1012 aa20.63■□□□□ 0.89
VARS2-202ENST00000421263 ZNF131P52739 623 aa20.63■□□□□ 0.89
VARS2-202ENST00000421263 ANGPT1Q15389 498 aa20.63■□□□□ 0.89
VARS2-202ENST00000421263 POTEHQ6S545 545 aa20.63■□□□□ 0.89
VARS2-202ENST00000421263 NPAS3Q8IXF0 933 aa20.63■□□□□ 0.89
VARS2-202ENST00000421263 FBXL5Q9UKA1 691 aa20.63■□□□□ 0.89
VARS2-202ENST00000421263 CFAP54Q96N23 3096 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 PRR23AA6NEV1 266 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 SEC24AO95486 1093 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 BMP15O95972 392 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 PIGRP01833 764 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 ADRB2P07550 413 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 RHOP08100 348 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 PTPN2P17706 415 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 ELF1P32519 619 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 LONP1P36776 959 aaKnown RBP20.62■□□□□ 0.89
VARS2-202ENST00000421263 GRIN1Q05586 938 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 TPGS2Q68CL5 300 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 BRAPQ7Z569 592 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 DDX12PQ92771 950 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 CALML4Q96GE6 196 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 REEP2Q9BRK0 252 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 TUBGCP4Q9UGJ1 667 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 SIT1Q9Y3P8 196 aa20.62■□□□□ 0.89
VARS2-202ENST00000421263 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.62■□□□□ 0.89
VARS2-202ENST00000421263 MYH15Q9Y2K3 1946 aa20.61■□□□□ 0.89
VARS2-202ENST00000421263 M0QZQ0 153 aa20.61■□□□□ 0.89
VARS2-202ENST00000421263 FAM189A1O60320 539 aa20.61■□□□□ 0.89
VARS2-202ENST00000421263 CXCL8P10145 99 aa20.61■□□□□ 0.89
VARS2-202ENST00000421263 CYP3A5P20815 502 aa20.61■□□□□ 0.89
VARS2-202ENST00000421263 SLC5A9Q2M3M2 681 aa20.61■□□□□ 0.89
VARS2-202ENST00000421263 FRMD5Q7Z6J6 570 aa20.61■□□□□ 0.89
VARS2-202ENST00000421263 FIZ1Q96SL8 496 aa20.61■□□□□ 0.89
VARS2-202ENST00000421263 GDE1Q9NZC3 331 aa20.61■□□□□ 0.89
VARS2-202ENST00000421263 MAFFQ9ULX9 164 aa20.61■□□□□ 0.89
VARS2-202ENST00000421263 TBX20Q9UMR3 447 aa20.61■□□□□ 0.89
VARS2-202ENST00000421263 PCDHB8Q9UN66 801 aa20.61■□□□□ 0.89
VARS2-202ENST00000421263 MRPS23Q9Y3D9 190 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms