RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 CLDN3O15551 220 aa22.26■■□□□ 1.15
MCF2L-212ENST00000420013 CFHP08603 1231 aa22.26■■□□□ 1.15
MCF2L-212ENST00000420013 RFX1P22670 979 aa22.26■■□□□ 1.15
MCF2L-212ENST00000420013 ABCD1P33897 745 aa22.26■■□□□ 1.15
MCF2L-212ENST00000420013 RAD51AP2Q09MP3 1159 aa22.26■■□□□ 1.15
MCF2L-212ENST00000420013 VARS2Q5ST30 1063 aaKnown RBP22.26■■□□□ 1.15
MCF2L-212ENST00000420013 PLEKHA5Q9HAU0 1116 aa22.26■■□□□ 1.15
MCF2L-212ENST00000420013 NUB1Q9Y5A7 615 aa22.26■■□□□ 1.15
MCF2L-212ENST00000420013 MYO15AQ9UKN7 3530 aa22.25■■□□□ 1.15
MCF2L-212ENST00000420013 SFI1A8K8P3 1242 aa22.25■■□□□ 1.15
MCF2L-212ENST00000420013 LONP1P36776 959 aaKnown RBP22.25■■□□□ 1.15
MCF2L-212ENST00000420013 UBA7P41226 1012 aa22.25■■□□□ 1.15
MCF2L-212ENST00000420013 NBL1P41271 181 aa22.25■■□□□ 1.15
MCF2L-212ENST00000420013 ROR1Q01973 937 aa22.25■■□□□ 1.15
MCF2L-212ENST00000420013 PABPC1LQ4VXU2 614 aaKnown RBP22.25■■□□□ 1.15
MCF2L-212ENST00000420013 LARP1BQ659C4 914 aaKnown RBP22.25■■□□□ 1.15
MCF2L-212ENST00000420013 PHLDB3Q6NSJ2 640 aa22.25■■□□□ 1.15
MCF2L-212ENST00000420013 SUSD3Q96L08 255 aa22.25■■□□□ 1.15
MCF2L-212ENST00000420013 AVENQ9NQS1 362 aaPredicted RBP22.25■■□□□ 1.15
MCF2L-212ENST00000420013 ARHGEF3Q9NR81 526 aa22.25■■□□□ 1.15
MCF2L-212ENST00000420013 POLIQ9UNA4 740 aa22.25■■□□□ 1.15
MCF2L-212ENST00000420013 ARHGEF37A1IGU5 675 aa22.24■■□□□ 1.15
MCF2L-212ENST00000420013 KRBA1A5PL33 1030 aa22.24■■□□□ 1.15
MCF2L-212ENST00000420013 I3L4J1 428 aa22.24■■□□□ 1.15
MCF2L-212ENST00000420013 GFRA3O60609 400 aa22.24■■□□□ 1.15
MCF2L-212ENST00000420013 PIGRP01833 764 aa22.24■■□□□ 1.15
MCF2L-212ENST00000420013 ZNF280DQ6N043 979 aa22.24■■□□□ 1.15
MCF2L-212ENST00000420013 RSPO2Q6UXX9 243 aaPredicted RBP22.24■■□□□ 1.15
MCF2L-212ENST00000420013 ZNF461Q8TAF7 563 aa22.24■■□□□ 1.15
MCF2L-212ENST00000420013 FGF13Q92913 245 aa22.24■■□□□ 1.15
MCF2L-212ENST00000420013 BICD1Q96G01 975 aa22.24■■□□□ 1.15
MCF2L-212ENST00000420013 ZBTB45Q96K62 511 aaPredicted RBP22.24■■□□□ 1.15
MCF2L-212ENST00000420013 XPOTO43592 962 aaKnown RBP22.23■■□□□ 1.15
MCF2L-212ENST00000420013 TBC1D4O60343 1298 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 CLTAP09496 248 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 ELF1P32519 619 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 ZNF131P52739 623 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 NTHL1P78549 312 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 SLC10A6Q3KNW5 377 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 ARSHQ5FYA8 562 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 TPGS2Q68CL5 300 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 HAUS6Q7Z4H7 955 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 GPBP1Q86WP2 473 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 APPL2Q8NEU8 664 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 GPR152Q8TDT2 470 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 TSPAN18Q96SJ8 248 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 PLIN2Q99541 437 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 REEP2Q9BRK0 252 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 TBC1D17Q9HA65 648 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 PARVGQ9HBI0 331 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 CA14Q9ULX7 337 aa22.23■■□□□ 1.15
MCF2L-212ENST00000420013 TSC2P49815 1807 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 ANK1P16157 1881 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 WDR27A2RRH5 827 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 HNRNPDLO14979 420 aaKnown RBP22.22■■□□□ 1.15
MCF2L-212ENST00000420013 MEFVO15553 781 aaPredicted RBP22.22■■□□□ 1.15
MCF2L-212ENST00000420013 ABLIM3O94929 683 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 FAM13AO94988 1023 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 LRG1P02750 347 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 CXCL8P10145 99 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 ATF2P15336 505 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 PDCP20941 246 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 IGFBP6P24592 240 aaPredicted RBP22.22■■□□□ 1.15
MCF2L-212ENST00000420013 LRPAP1P30533 357 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 MCM4P33991 863 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 MATR3P43243 847 aaKnown RBP eCLIP22.22■■□□□ 1.15
MCF2L-212ENST00000420013 LIG4P49917 911 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 MRPL58Q14197 206 aaKnown RBP22.22■■□□□ 1.15
MCF2L-212ENST00000420013 NPAS3Q8IXF0 933 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 DTWD2Q8NBA8 298 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 FGF14Q92915 247 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 C18orf25Q96B23 403 aaPredicted RBP22.22■■□□□ 1.15
MCF2L-212ENST00000420013 MAFFQ9ULX9 164 aa22.22■■□□□ 1.15
MCF2L-212ENST00000420013 UBQLN1Q9UMX0 589 aaKnown RBP22.22■■□□□ 1.15
MCF2L-212ENST00000420013 TTC26A0AVF1 554 aa22.21■■□□□ 1.15
MCF2L-212ENST00000420013 K7ENM7 598 aa22.21■■□□□ 1.15
MCF2L-212ENST00000420013 PLCG1P19174 1290 aa22.21■■□□□ 1.15
MCF2L-212ENST00000420013 CYP3A5P20815 502 aa22.21■■□□□ 1.15
MCF2L-212ENST00000420013 CACNB1Q02641 598 aaPredicted RBP22.21■■□□□ 1.15
MCF2L-212ENST00000420013 PPP2R3AQ06190 1150 aa22.21■■□□□ 1.15
MCF2L-212ENST00000420013 TCEAL8Q8IYN2 117 aa22.21■■□□□ 1.15
MCF2L-212ENST00000420013 RASSF8Q8NHQ8 419 aa22.21■■□□□ 1.15
MCF2L-212ENST00000420013 ITFG1Q8TB96 612 aa22.21■■□□□ 1.15
MCF2L-212ENST00000420013 SHDQ96IW2 340 aa22.21■■□□□ 1.15
MCF2L-212ENST00000420013 OXCT2Q9BYC2 517 aaPredicted RBP22.21■■□□□ 1.15
MCF2L-212ENST00000420013 BLOC1S4Q9NUP1 217 aa22.21■■□□□ 1.15
MCF2L-212ENST00000420013 GDE1Q9NZC3 331 aa22.21■■□□□ 1.15
MCF2L-212ENST00000420013 DNMT3BQ9UBC3 853 aaKnown RBP22.21■■□□□ 1.15
MCF2L-212ENST00000420013 TUBGCP4Q9UGJ1 667 aa22.21■■□□□ 1.15
MCF2L-212ENST00000420013 PCDHB8Q9UN66 801 aa22.21■■□□□ 1.15
MCF2L-212ENST00000420013 ZFHX2Q9C0A1 2572 aaPredicted RBP22.21■■□□□ 1.15
MCF2L-212ENST00000420013 VPS13AQ96RL7 3174 aa22.2■■□□□ 1.14
MCF2L-212ENST00000420013 PRRG1O14668 218 aa22.2■■□□□ 1.14
MCF2L-212ENST00000420013 OGTO15294 1046 aa22.2■■□□□ 1.14
MCF2L-212ENST00000420013 PI15O43692 258 aa22.2■■□□□ 1.14
MCF2L-212ENST00000420013 TBCAO75347 108 aaKnown RBP22.2■■□□□ 1.14
MCF2L-212ENST00000420013 RHOP08100 348 aa22.2■■□□□ 1.14
MCF2L-212ENST00000420013 PFKPQ01813 784 aa22.2■■□□□ 1.14
MCF2L-212ENST00000420013 CUL4AQ13619 759 aa22.2■■□□□ 1.14
MCF2L-212ENST00000420013 PARM1Q6UWI2 310 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms