RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 TSPEARQ8WU66 669 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 CCDC136Q96JN2 1154 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 UHRF1Q96T88 793 aaPredicted RBP4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 REXO4Q9GZR2 422 aaKnown RBP4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 BCO1Q9HAY6 547 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 ZNF277Q9NRM2 450 aaPredicted RBP4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 GPRC5DQ9NZD1 345 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 NOX1Q9Y5S8 564 aa4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 COL3A1P02461 1466 aaPredicted RBP4.34□□□□□ -1.71
SDCBPP3-201ENST00000419629 SETD1BQ9UPS6 1966 aaKnown RBP4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 XPOTO43592 962 aaKnown RBP4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 ITGA10O75578 1167 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 C1QL1O75973 258 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 CDKL5O76039 1030 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 MATN4O95460 622 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 MT-CO1P00395 513 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 IARSP41252 1262 aaKnown RBP4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 ZNF169Q14929 603 aaPredicted RBP4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 ABCB5Q2M3G0 1257 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 MST1LQ2TV78 715 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 AGAP9Q5VTM2 703 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 ABHD15Q6UXT9 468 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 BHLHA9Q7RTU4 235 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 ANKS1AQ92625 1134 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 CEP95Q96GE4 821 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 FAXDC2Q96IV6 333 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 MANSC1Q9H8J5 431 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 TYW1Q9NV66 732 aaKnown RBP4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 ATP11BQ9Y2G3 1177 aa4.33□□□□□ -1.72
SDCBPP3-201ENST00000419629 WASHC2CQ9Y4E1 1318 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 DRGXA6NNA5 263 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 TEX33O43247 280 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 RBMXL2O75526 392 aaKnown RBP4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 GSPT1P15170 499 aaKnown RBP4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 FDXRP22570 491 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 ADSLP30566 484 aaPredicted RBP4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 MCAMP43121 646 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 RARRES1P49788 294 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 CHN2P52757 468 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 EVA1CP58658 441 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 SIM1P81133 766 aaPredicted RBP4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 MGAT2Q10469 447 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 NOMO1Q15155 1222 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 INAVAQ3KP66 663 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 MFSD14BQ5SR56 506 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 LCE1AQ5T7P2 110 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 GPR149Q86SP6 731 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 ARHGEF25Q86VW2 580 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 SRRM1Q8IYB3 904 aaKnown RBP4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 OR7D4Q8NG98 312 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 MDM1Q8TC05 714 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 CYFIP2Q96F07 1278 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 FUBP3Q96I24 572 aaKnown RBP eCLIP4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 LANCL2Q9NS86 450 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 MOCS1Q9NZB8 636 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 LRIT1Q9P2V4 623 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 DNM3Q9UQ16 869 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 PCDHGA2Q9Y5H1 932 aa4.32□□□□□ -1.72
SDCBPP3-201ENST00000419629 MYADML2A6NDP7 307 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 GABRDO14764 452 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 SNUPNO95149 360 aaKnown RBP4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 RPLP2P05387 115 aaKnown RBP4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 ELANEP08246 267 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 IL2RBP14784 551 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 PTPN7P35236 360 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 FLT3LGP49771 235 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 EXOSC10Q01780 885 aaKnown RBP4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 ATP2B3Q16720 1220 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 PTPN21Q16825 1174 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 EFCAB2Q5VUJ9 269 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 MIGA2Q7L4E1 593 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 PQLC1Q8N2U9 271 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 CBARPQ8N350 705 aaPredicted RBP4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 SLC35B2Q8TB61 432 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 FUBP1Q96AE4 644 aaKnown RBP4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 GPATCH3Q96I76 525 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 Q96MF0 132 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 SMAD5Q99717 465 aaKnown RBP4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 C7orf25Q9BPX7 421 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 HEPHQ9BQS7 1158 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 SLC13A1Q9BZW2 595 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 SENP6Q9GZR1 1112 aaPredicted RBP4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 CCDC8Q9H0W5 538 aaPredicted RBP4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 SEMA4GQ9NTN9 838 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 TMEM140Q9NV12 185 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 KLHL11Q9NVR0 708 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 TBCCD1Q9NVR7 557 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 SCOCQ9UIL1 159 aa4.31□□□□□ -1.72
SDCBPP3-201ENST00000419629 LRRC3CA6NJW4 275 aa4.3□□□□□ -1.72
SDCBPP3-201ENST00000419629 MGST3O14880 152 aa4.3□□□□□ -1.72
SDCBPP3-201ENST00000419629 NDUFS2O75306 463 aa4.3□□□□□ -1.72
SDCBPP3-201ENST00000419629 SNRPA1P09661 255 aaKnown RBP4.3□□□□□ -1.72
SDCBPP3-201ENST00000419629 BRDTQ58F21 947 aaPredicted RBP4.3□□□□□ -1.72
SDCBPP3-201ENST00000419629 RRP12Q5JTH9 1297 aaKnown RBP4.3□□□□□ -1.72
SDCBPP3-201ENST00000419629 PRAMEF14Q5SWL7 426 aa4.3□□□□□ -1.72
SDCBPP3-201ENST00000419629 ATXN7L2Q5T6C5 722 aaPredicted RBP4.3□□□□□ -1.72
SDCBPP3-201ENST00000419629 B3GNTL1Q67FW5 361 aaPredicted RBP4.3□□□□□ -1.72
SDCBPP3-201ENST00000419629 PPP4R3AQ6IN85 833 aa4.3□□□□□ -1.72
SDCBPP3-201ENST00000419629 ZBTB46Q86UZ6 589 aa4.3□□□□□ -1.72
SDCBPP3-201ENST00000419629 RHOT2Q8IXI1 618 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms