RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ADH1AP07327 375 aa22.46■■□□□ 1.19
PKNOX1-202ENST00000418336 IDEP14735 1019 aa22.46■■□□□ 1.19
PKNOX1-202ENST00000418336 WNT7BP56706 349 aa22.46■■□□□ 1.19
PKNOX1-202ENST00000418336 KYAT1Q16773 422 aa22.46■■□□□ 1.19
PKNOX1-202ENST00000418336 RARS2Q5T160 578 aaKnown RBP22.46■■□□□ 1.19
PKNOX1-202ENST00000418336 MSTO1Q9BUK6 570 aa22.46■■□□□ 1.19
PKNOX1-202ENST00000418336 C11orf16Q9NQ32 467 aa22.46■■□□□ 1.19
PKNOX1-202ENST00000418336 TBC1D4O60343 1298 aa22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 CYP3A5P20815 502 aa22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 CMA1P23946 247 aa22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 TKTP29401 623 aaKnown RBP22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 RPL9P32969 192 aaKnown RBP22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 AARSP49588 968 aaKnown RBP eCLIP22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 ACOT2P49753 483 aa22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 GUCY2FP51841 1108 aa22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 ELAVL2Q12926 359 aaKnown RBP22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 MRPL58Q14197 206 aaKnown RBP22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 ADALQ6DHV7 355 aa22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 KIAA1841Q6NSI8 718 aa22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 CMASQ8NFW8 434 aaPredicted RBP22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 SFXN1Q9H9B4 322 aa22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 MAGEF1Q9HAY2 307 aa22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 MAN1C1Q9NR34 630 aa22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 MTRRQ9UBK8 725 aa22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 KCNH3Q9ULD8 1083 aa22.45■■□□□ 1.18
PKNOX1-202ENST00000418336 PPEF2O14830 753 aa22.44■■□□□ 1.18
PKNOX1-202ENST00000418336 GCNT3O95395 438 aa22.44■■□□□ 1.18
PKNOX1-202ENST00000418336 PFKFB1P16118 471 aa22.44■■□□□ 1.18
PKNOX1-202ENST00000418336 MATR3P43243 847 aaKnown RBP eCLIP22.44■■□□□ 1.18
PKNOX1-202ENST00000418336 KRT85P78386 507 aa22.44■■□□□ 1.18
PKNOX1-202ENST00000418336 PSMD5Q16401 504 aa22.44■■□□□ 1.18
PKNOX1-202ENST00000418336 SLFN12LQ6IEE8 588 aa22.44■■□□□ 1.18
PKNOX1-202ENST00000418336 GPR149Q86SP6 731 aa22.44■■□□□ 1.18
PKNOX1-202ENST00000418336 GRAMD1CQ8IYS0 662 aa22.44■■□□□ 1.18
PKNOX1-202ENST00000418336 ZNF707Q96C28 371 aaPredicted RBP22.44■■□□□ 1.18
PKNOX1-202ENST00000418336 ACCSQ96QU6 501 aa22.44■■□□□ 1.18
PKNOX1-202ENST00000418336 RHOBTB2Q9BYZ6 727 aa22.44■■□□□ 1.18
PKNOX1-202ENST00000418336 SERTAD1Q9UHV2 236 aa22.44■■□□□ 1.18
PKNOX1-202ENST00000418336 AGO2Q9UKV8 859 aaKnown RBP22.44■■□□□ 1.18
PKNOX1-202ENST00000418336 KLRC4O43908 158 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 PRPF6O94906 941 aaKnown RBP22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 GLUD1P00367 558 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 NFICP08651 508 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 SPATA31D3P0C874 917 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 POU5F1Q01860 360 aaKnown RBP22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 CREMQ03060 361 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 PPP2R3AQ06190 1150 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 CUL4BQ13620 913 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 ALCAMQ13740 583 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 SPATA1Q5VX52 437 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 JADE1Q6IE81 842 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 TMC5Q6UXY8 1006 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 SPATA31D4Q6ZUB0 917 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 CEP57Q86XR8 500 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 PALB2Q86YC2 1186 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 CCDC65Q8IXS2 484 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 HDAC7Q8WUI4 952 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 KIF12Q96FN5 646 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 SUSD3Q96L08 255 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 SPATA32Q96LK8 384 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 POP1Q99575 1024 aaKnown RBP22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 BLZF1Q9H2G9 400 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 RPF1Q9H9Y2 349 aaKnown RBP22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 FAM13BQ9NYF5 915 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 FBXW11Q9UKB1 542 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 PCDHB13Q9Y5F0 798 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 BACE2Q9Y5Z0 518 aa22.43■■□□□ 1.18
PKNOX1-202ENST00000418336 A0A1B0GVL5 298 aa22.42■■□□□ 1.18
PKNOX1-202ENST00000418336 RFPL2O75678 378 aa22.42■■□□□ 1.18
PKNOX1-202ENST00000418336 SLFN14P0C7P3 912 aa22.42■■□□□ 1.18
PKNOX1-202ENST00000418336 SSTR3P32745 418 aaPredicted RBP22.42■■□□□ 1.18
PKNOX1-202ENST00000418336 UNC13DQ70J99 1090 aa22.42■■□□□ 1.18
PKNOX1-202ENST00000418336 RNF135Q8IUD6 432 aa22.42■■□□□ 1.18
PKNOX1-202ENST00000418336 GLYCTKQ8IVS8 523 aa22.42■■□□□ 1.18
PKNOX1-202ENST00000418336 TSPAN18Q96SJ8 248 aa22.42■■□□□ 1.18
PKNOX1-202ENST00000418336 CBWD1Q9BRT8 395 aa22.42■■□□□ 1.18
PKNOX1-202ENST00000418336 LRRC27Q9C0I9 530 aa22.42■■□□□ 1.18
PKNOX1-202ENST00000418336 GOLPH3LQ9H4A5 285 aa22.42■■□□□ 1.18
PKNOX1-202ENST00000418336 UBQLN1Q9UMX0 589 aaKnown RBP22.42■■□□□ 1.18
PKNOX1-202ENST00000418336 M0QZQ0 153 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 GARTP22102 1010 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 ASIC1P78348 528 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 AMPD3Q01432 767 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 RAB33AQ14088 237 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 BECN1Q14457 450 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 SCARA3Q6AZY7 606 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 C15orf39Q6ZRI6 1047 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 CD302Q8IX05 232 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 EFCAB13Q8IY85 973 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 TMEM87AQ8NBN3 555 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 CXorf38Q8TB03 319 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 ZNF507Q8TCN5 953 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 PAGE5Q96GU1 130 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 NECTIN4Q96NY8 510 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 DERAQ9Y315 318 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 TSC2P49815 1807 aa22.41■■□□□ 1.18
PKNOX1-202ENST00000418336 ANO9A1A5B4 782 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 SYN3O14994 580 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 SPTLC1O15269 473 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 EIF3DO15371 548 aaKnown RBP eCLIP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms