RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 PDILTQ8N807 584 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 C12orf76Q8N812 135 aaPredicted RBP10.51□□□□□ -0.73
LINC01090-201ENST00000415357 TMEM87AQ8NBN3 555 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 BICD1Q96G01 975 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 ZNF396Q96N95 335 aaPredicted RBP10.51□□□□□ -0.73
LINC01090-201ENST00000415357 KLHL5Q96PQ7 755 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 FIZ1Q96SL8 496 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 TCHPQ9BT92 498 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 CCDC94Q9BW85 323 aaPredicted RBP10.51□□□□□ -0.73
LINC01090-201ENST00000415357 COLEC11Q9BWP8 271 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 HAPLN2Q9GZV7 340 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 PARVGQ9HBI0 331 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 GOLGA2P5Q9HBQ8 144 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 EVA1BQ9NVM1 165 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 STK17AQ9UEE5 414 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 CCDC39Q9UFE4 941 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 ADAM28Q9UKQ2 775 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 FAM50BQ9Y247 325 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 IRAK3Q9Y616 596 aa10.51□□□□□ -0.73
LINC01090-201ENST00000415357 FSD2A1L4K1 749 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 MYMKA6NI61 221 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 TRAK2O60296 914 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 TADA2AO75478 443 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 TOM1L1O75674 476 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 WEE2P0C1S8 567 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 SRGAP2BP0DMP2 458 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 MYBP10242 640 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 MCF2P10911 925 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 STAT6P42226 847 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 MATR3P43243 847 aaKnown RBP eCLIP10.5□□□□□ -0.733e-8■■■■■ 27.9
LINC01090-201ENST00000415357 GLUD2P49448 558 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 SOX4Q06945 474 aaPredicted RBP10.5□□□□□ -0.73
LINC01090-201ENST00000415357 NOLC1Q14978 699 aaKnown RBP eCLIP10.5□□□□□ -0.73
LINC01090-201ENST00000415357 RARS2Q5T160 578 aaKnown RBP10.5□□□□□ -0.73
LINC01090-201ENST00000415357 APBB1IPQ7Z5R6 666 aaPredicted RBP10.5□□□□□ -0.73
LINC01090-201ENST00000415357 SFR1Q86XK3 245 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 GLYCTKQ8IVS8 523 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 ADHFE1Q8IWW8 467 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 TMEM130Q8N3G9 435 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 SLC22A17Q8WUG5 538 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 CASP10Q92851 521 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 CHAMP1Q96JM3 812 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 SNX27Q96L92 541 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 ZMAT2Q96NC0 199 aaKnown RBP10.5□□□□□ -0.73
LINC01090-201ENST00000415357 PPP1R10Q96QC0 940 aaKnown RBP10.5□□□□□ -0.73
LINC01090-201ENST00000415357 S1PR5Q9H228 398 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 IKZF4Q9H2S9 585 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 EPHX3Q9H6B9 360 aa10.5□□□□□ -0.73
LINC01090-201ENST00000415357 MRPL17Q9NRX2 175 aaKnown RBP10.5□□□□□ -0.73
LINC01090-201ENST00000415357 MORC2Q9Y6X9 1032 aaPredicted RBP10.5□□□□□ -0.73
LINC01090-201ENST00000415357 SMIM28A0A1B0GU29 152 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 TISP43B9A030 160 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 TEX28O15482 410 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 YEATS4O95619 227 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 BRD1O95696 1058 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 F12P00748 615 aaPredicted RBP10.49□□□□□ -0.73
LINC01090-201ENST00000415357 RPL17P18621 184 aaKnown RBP10.49□□□□□ -0.73
LINC01090-201ENST00000415357 SP100P23497 879 aaPredicted RBP10.49□□□□□ -0.73
LINC01090-201ENST00000415357 KLRC2P26717 231 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 CLCN4P51793 760 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 CLCNKBP51801 687 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 YARSP54577 528 aaKnown RBP10.49□□□□□ -0.73
LINC01090-201ENST00000415357 DSG1Q02413 1049 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 MCL1Q07820 350 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 TMEM259Q4ZIN3 620 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 ZC2HC1CQ53FD0 456 aaPredicted RBP10.49□□□□□ -0.73
LINC01090-201ENST00000415357 RTP2Q5QGT7 225 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 ZBTB41Q5SVQ8 909 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 KIAA0319Q5VV43 1072 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 SLC39A4Q6P5W5 647 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 PRSS55Q6UWB4 352 aaPredicted RBP10.49□□□□□ -0.73
LINC01090-201ENST00000415357 ZPBP2Q6X784 338 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 CCDC73Q6ZRK6 1079 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 SV2BQ7L1I2 683 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 C3orf58Q8NDZ4 430 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 RIN2Q8WYP3 895 aaPredicted RBP10.49□□□□□ -0.73
LINC01090-201ENST00000415357 SUSD6Q92537 303 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 STAMQ92783 540 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 C18orf25Q96B23 403 aaPredicted RBP10.49□□□□□ -0.73
LINC01090-201ENST00000415357 DNAJC19Q96DA6 116 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 ACAP3Q96P50 834 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 EMILIN2Q9BXX0 1053 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 TOPORSQ9NS56 1045 aaPredicted RBP10.49□□□□□ -0.73
LINC01090-201ENST00000415357 CHST7Q9NS84 486 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 TBC1D7Q9P0N9 293 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 PRKAG3Q9UGI9 489 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 TBX20Q9UMR3 447 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 SF3B1O75533 1304 aaKnown RBP eCLIP10.49□□□□□ -0.732e-6■■■■■ 126
LINC01090-201ENST00000415357 PLXNA3P51805 1871 aa10.49□□□□□ -0.73
LINC01090-201ENST00000415357 NCOR1O75376 2440 aa10.48□□□□□ -0.73
LINC01090-201ENST00000415357 H0YCG3 227 aa10.48□□□□□ -0.73
LINC01090-201ENST00000415357 I3L4J1 428 aa10.48□□□□□ -0.73
LINC01090-201ENST00000415357 HNRNPDLO14979 420 aaKnown RBP10.48□□□□□ -0.73
LINC01090-201ENST00000415357 CLDN3O15551 220 aa10.48□□□□□ -0.73
LINC01090-201ENST00000415357 PPP6R2O75170 966 aa10.48□□□□□ -0.73
LINC01090-201ENST00000415357 CXCL8P10145 99 aa10.48□□□□□ -0.73
LINC01090-201ENST00000415357 HOXB8P17481 243 aaPredicted RBP10.48□□□□□ -0.73
LINC01090-201ENST00000415357 TNFSF9P41273 254 aa10.48□□□□□ -0.73
LINC01090-201ENST00000415357 RPIAP49247 311 aa10.48□□□□□ -0.73
LINC01090-201ENST00000415357 LIG4P49917 911 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms