RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 C11orf54Q9H0W9 315 aaPredicted RBP7.06□□□□□ -1.28
ATG4C-204ENST00000414558 SYBUQ9NX95 663 aa7.06□□□□□ -1.28
ATG4C-204ENST00000414558 KCNE5Q9UJ90 142 aa7.06□□□□□ -1.28
ATG4C-204ENST00000414558 KIAA0391O15091 583 aaKnown RBP7.05□□□□□ -1.28
ATG4C-204ENST00000414558 PPFIA2O75334 1257 aa7.05□□□□□ -1.28
ATG4C-204ENST00000414558 KATNA1O75449 491 aa7.05□□□□□ -1.28
ATG4C-204ENST00000414558 GPANK1O95872 356 aa7.05□□□□□ -1.28
ATG4C-204ENST00000414558 LMNAP02545 664 aaKnown RBP7.05□□□□□ -1.28
ATG4C-204ENST00000414558 CKBP12277 381 aa7.05□□□□□ -1.28
ATG4C-204ENST00000414558 C5AR1P21730 350 aa7.05□□□□□ -1.28
ATG4C-204ENST00000414558 CDC42EP1Q00587 391 aa7.05□□□□□ -1.28
ATG4C-204ENST00000414558 DNAJC10Q8IXB1 793 aa7.05□□□□□ -1.28
ATG4C-204ENST00000414558 GPR150Q8NGU9 434 aa7.05□□□□□ -1.28
ATG4C-204ENST00000414558 ASB10Q8WXI3 467 aa7.05□□□□□ -1.28
ATG4C-204ENST00000414558 LINC00476Q8WZB0 136 aa7.05□□□□□ -1.28
ATG4C-204ENST00000414558 GALNT9Q9HCQ5 603 aa7.05□□□□□ -1.28
ATG4C-204ENST00000414558 SGTAO43765 313 aa7.04□□□□□ -1.28
ATG4C-204ENST00000414558 EGR2P11161 476 aaPredicted RBP7.04□□□□□ -1.28
ATG4C-204ENST00000414558 ITGAMP11215 1152 aa7.04□□□□□ -1.28
ATG4C-204ENST00000414558 BMP5P22003 454 aa7.04□□□□□ -1.28
ATG4C-204ENST00000414558 NANOS3P60323 173 aaKnown RBP7.04□□□□□ -1.28
ATG4C-204ENST00000414558 CXADRP78310 365 aa7.04□□□□□ -1.28
ATG4C-204ENST00000414558 NUP133Q8WUM0 1156 aa7.04□□□□□ -1.28
ATG4C-204ENST00000414558 RNF31Q96EP0 1072 aa7.04□□□□□ -1.28
ATG4C-204ENST00000414558 BOD1Q96IK1 185 aa7.04□□□□□ -1.28
ATG4C-204ENST00000414558 TMX3Q96JJ7 454 aa7.04□□□□□ -1.28
ATG4C-204ENST00000414558 CCDC8Q9H0W5 538 aaPredicted RBP7.04□□□□□ -1.28
ATG4C-204ENST00000414558 GSTO2Q9H4Y5 243 aa7.04□□□□□ -1.28
ATG4C-204ENST00000414558 TCRBV7S2A1N4TA0A589 114 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 CDHR4A6H8M9 788 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 GABRDO14764 452 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 PCDHGA12O60330 932 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 HAUS5O94927 633 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 PRSS23O95084 383 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 ADRA1BP35368 520 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 HSD11B2P80365 405 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 FAM50AQ14320 339 aaKnown RBP7.03□□□□□ -1.28
ATG4C-204ENST00000414558 FUBP1Q96AE4 644 aaKnown RBP7.03□□□□□ -1.28
ATG4C-204ENST00000414558 TEKT5Q96M29 485 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 CRAMP1Q96RY5 1269 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 PNKPQ96T60 521 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 TMEM74BQ9NUR3 256 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 TESQ9UGI8 421 aaKnown RBP7.03□□□□□ -1.28
ATG4C-204ENST00000414558 PCDHGA9Q9Y5G4 932 aaKnown RBP7.03□□□□□ -1.28
ATG4C-204ENST00000414558 PCDHGA8Q9Y5G5 932 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 PCDHGA7Q9Y5G6 932 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 PCDHGA6Q9Y5G7 932 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 PCDHGA3Q9Y5H0 932 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 PCDHA13Q9Y5I0 950 aa7.03□□□□□ -1.28
ATG4C-204ENST00000414558 FZD9O00144 591 aa7.02□□□□□ -1.29
ATG4C-204ENST00000414558 HTRA2O43464 458 aaPredicted RBP7.02□□□□□ -1.29
ATG4C-204ENST00000414558 MTHFD1P11586 935 aaKnown RBP7.02□□□□□ -1.29
ATG4C-204ENST00000414558 FDXRP22570 491 aa7.02□□□□□ -1.29
ATG4C-204ENST00000414558 SEC24CP53992 1094 aa7.02□□□□□ -1.29
ATG4C-204ENST00000414558 KIF23Q02241 960 aaPredicted RBP7.02□□□□□ -1.29
ATG4C-204ENST00000414558 TARDBPQ13148 414 aaKnown RBP eCLIP7.02□□□□□ -1.29
ATG4C-204ENST00000414558 PPP4R3AQ6IN85 833 aa7.02□□□□□ -1.29
ATG4C-204ENST00000414558 PNMA8AQ86V59 439 aaPredicted RBP7.02□□□□□ -1.29
ATG4C-204ENST00000414558 TBC1D15Q8TC07 691 aa7.02□□□□□ -1.29
ATG4C-204ENST00000414558 MED15Q96RN5 788 aa7.02□□□□□ -1.29
ATG4C-204ENST00000414558 TBCCD1Q9NVR7 557 aa7.02□□□□□ -1.29
ATG4C-204ENST00000414558 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.02□□□□□ -1.29
ATG4C-204ENST00000414558 USP25Q9UHP3 1055 aa7.02□□□□□ -1.29
ATG4C-204ENST00000414558 MTO1Q9Y2Z2 717 aaKnown RBP7.02□□□□□ -1.29
ATG4C-204ENST00000414558 IPPQ9Y573 584 aa7.02□□□□□ -1.29
ATG4C-204ENST00000414558 EPN1Q9Y6I3 576 aaPredicted RBP7.02□□□□□ -1.29
ATG4C-204ENST00000414558 AATKQ6ZMQ8 1374 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 ERN1O75460 977 aaKnown RBP7.01□□□□□ -1.29
ATG4C-204ENST00000414558 NUDT3O95989 172 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 RPLP2P05387 115 aaKnown RBP7.01□□□□□ -1.29
ATG4C-204ENST00000414558 NOMO3P69849 1222 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 SCAPQ12770 1279 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 RAB39AQ14964 217 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 PCBP2Q15366 365 aaKnown RBP eCLIP7.01□□□□□ -1.29
ATG4C-204ENST00000414558 PABPC1LQ4VXU2 614 aaKnown RBP7.01□□□□□ -1.29
ATG4C-204ENST00000414558 NOMO2Q5JPE7 1267 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 EFCAB2Q5VUJ9 269 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 OLFML1Q6UWY5 402 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 GPR149Q86SP6 731 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 DCBLD1Q8N8Z6 715 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 IFI44Q8TCB0 444 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 SLC9A6Q92581 669 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 RAB24Q969Q5 203 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 MARS2Q96GW9 593 aaKnown RBP7.01□□□□□ -1.29
ATG4C-204ENST00000414558 SLC13A1Q9BZW2 595 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 ZNHIT2Q9UHR6 403 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 COL4A3BPQ9Y5P4 624 aa7.01□□□□□ -1.29
ATG4C-204ENST00000414558 CCDC154A6NI56 674 aa7□□□□□ -1.29
ATG4C-204ENST00000414558 ESRRBO95718 433 aa7□□□□□ -1.29
ATG4C-204ENST00000414558 MPP3Q13368 585 aa7□□□□□ -1.29
ATG4C-204ENST00000414558 PTPN21Q16825 1174 aa7□□□□□ -1.29
ATG4C-204ENST00000414558 ERCC6LQ2NKX8 1250 aa7□□□□□ -1.29
ATG4C-204ENST00000414558 COLGALT2Q8IYK4 626 aa7□□□□□ -1.29
ATG4C-204ENST00000414558 ZCRB1Q8TBF4 217 aaKnown RBP7□□□□□ -1.29
ATG4C-204ENST00000414558 COA7Q96BR5 231 aa7□□□□□ -1.29
ATG4C-204ENST00000414558 PCDH12Q9NPG4 1184 aa7□□□□□ -1.29
ATG4C-204ENST00000414558 LIMCH1Q9UPQ0 1083 aa7□□□□□ -1.29
ATG4C-204ENST00000414558 SPEF1Q9Y4P9 236 aa7□□□□□ -1.29
ATG4C-204ENST00000414558 MAST3O60307 1309 aa7□□□□□ -1.29
ATG4C-204ENST00000414558 CCDC78A2IDD5 438 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms