RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 PTPN21Q16825 1174 aa18.44■□□□□ 0.54
SCAMP4-204ENST00000414057 FUT10Q6P4F1 479 aa18.44■□□□□ 0.54
SCAMP4-204ENST00000414057 CYP26C1Q6V0L0 522 aa18.44■□□□□ 0.54
SCAMP4-204ENST00000414057 C15orf39Q6ZRI6 1047 aa18.44■□□□□ 0.54
SCAMP4-204ENST00000414057 C1orf186Q6ZWK4 172 aa18.44■□□□□ 0.54
SCAMP4-204ENST00000414057 C12orf76Q8N812 135 aaPredicted RBP18.44■□□□□ 0.54
SCAMP4-204ENST00000414057 TDRD5Q8NAT2 981 aaKnown RBP18.44■□□□□ 0.54
SCAMP4-204ENST00000414057 RXFP1Q9HBX9 757 aa18.44■□□□□ 0.54
SCAMP4-204ENST00000414057 CHST7Q9NS84 486 aa18.44■□□□□ 0.54
SCAMP4-204ENST00000414057 SF3B1O75533 1304 aaKnown RBP eCLIP18.43■□□□□ 0.549e-6■■■■■ 68.9
SCAMP4-204ENST00000414057 BICDL2A1A5D9 508 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 TMEM221A6NGB7 291 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 CCDC169A6NNP5 214 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 M0R296 226 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 TBCAO75347 108 aaKnown RBP18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 CD44P16070 742 aaKnown RBP18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 GUCY2CP25092 1073 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 PRCPP42785 496 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 SIGLEC14Q08ET2 396 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 ATF7IP2Q5U623 682 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 KIAA0319Q5VV43 1072 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 SPATA1Q5VX52 437 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 FOXR2Q6PJQ5 311 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 TMC5Q6UXY8 1006 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 HFE2Q6ZVN8 426 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 GPR149Q86SP6 731 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 GUF1Q8N442 669 aaKnown RBP18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 HDAC7Q8WUI4 952 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 SEL1LQ9UBV2 794 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 GDAQ9Y2T3 454 aa18.43■□□□□ 0.54
SCAMP4-204ENST00000414057 TEX28O15482 410 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 RECQL4O94761 1208 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 EFEMP2O95967 443 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 GLUD1P00367 558 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 SP100P23497 879 aaPredicted RBP18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 PEX3P56589 373 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 STK4Q13043 487 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 FAM26FQ5R3K3 315 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 CCDC149Q6ZUS6 474 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 TAS1R1Q7RTX1 841 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 SMYD4Q8IYR2 804 aaPredicted RBP18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 PBXIP1Q96AQ6 731 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 ACSF2Q96CM8 615 aaPredicted RBP18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 PDLIM2Q96JY6 352 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 PPP1R9BQ96SB3 815 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 REEP2Q9BRK0 252 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 KIFC3Q9BVG8 833 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 RUSC1Q9BVN2 902 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 TMEM134Q9H6X4 195 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 TNFSF13BQ9Y275 285 aa18.42■□□□□ 0.54
SCAMP4-204ENST00000414057 C2CD4DB7Z1M9 353 aa18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 ELAVL2Q12926 359 aaKnown RBP18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 KLHL10Q6JEL2 608 aa18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 SUGP1Q8IWZ8 645 aaKnown RBP18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 UBALD2Q8IYN6 164 aa18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 ZDHHC14Q8IZN3 488 aa18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 CMASQ8NFW8 434 aaPredicted RBP18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 NELFBQ8WX92 580 aa18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 MRPL4Q9BYD3 311 aaKnown RBP18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 KMT5AQ9NQR1 393 aa18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 MAN1C1Q9NR34 630 aa18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 OLFML3Q9NRN5 406 aa18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 FNIP2Q9P278 1114 aa18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 CDH22Q9UJ99 828 aa18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 SORCS3Q9UPU3 1222 aa18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 CTNND2Q9UQB3 1225 aa18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 NFE2L3Q9Y4A8 694 aa18.41■□□□□ 0.54
SCAMP4-204ENST00000414057 TTLL13PA6NNM8 815 aa18.4■□□□□ 0.54
SCAMP4-204ENST00000414057 HIP1RO75146 1068 aa18.4■□□□□ 0.54
SCAMP4-204ENST00000414057 WEE2P0C1S8 567 aa18.4■□□□□ 0.54
SCAMP4-204ENST00000414057 NPTX2P47972 431 aa18.4■□□□□ 0.54
SCAMP4-204ENST00000414057 YARSP54577 528 aaKnown RBP18.4■□□□□ 0.54
SCAMP4-204ENST00000414057 MTMR3Q13615 1198 aa18.4■□□□□ 0.54
SCAMP4-204ENST00000414057 PDXDC1Q6P996 788 aa18.4■□□□□ 0.54
SCAMP4-204ENST00000414057 OTOP3Q7RTS5 596 aa18.4■□□□□ 0.54
SCAMP4-204ENST00000414057 KIAA0895Q8NCT3 520 aa18.4■□□□□ 0.54
SCAMP4-204ENST00000414057 GPR62Q9BZJ7 368 aa18.4■□□□□ 0.54
SCAMP4-204ENST00000414057 PLEKHA4Q9H4M7 779 aa18.4■□□□□ 0.54
SCAMP4-204ENST00000414057 POLD4Q9HCU8 107 aa18.4■□□□□ 0.54
SCAMP4-204ENST00000414057 TOPORSQ9NS56 1045 aaPredicted RBP18.4■□□□□ 0.54
SCAMP4-204ENST00000414057 CASTOR2A6NHX0 329 aa18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 FAM13AO94988 1023 aa18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 ADCY5O95622 1261 aa18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 CCNE1P24864 410 aa18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 ZNF131P52739 623 aa18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 SMTNP53814 917 aa18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 PLCB2Q00722 1185 aa18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 TPD52L1Q16890 204 aaPredicted RBP18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 EEF1DP3Q658K8 133 aa18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 NOC3LQ8WTT2 800 aaKnown RBP18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 RIN2Q8WYP3 895 aaPredicted RBP18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 PRRX2Q99811 253 aa18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 CCDC94Q9BW85 323 aaPredicted RBP18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 RHOBTB2Q9BYZ6 727 aa18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 TRIM5Q9C035 493 aa18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 PARVGQ9HBI0 331 aa18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 SLC39A2Q9NP94 309 aa18.39■□□□□ 0.54
SCAMP4-204ENST00000414057 NPHP3-ACAD11A0A0J9YXS1 232 aa18.39■□□□□ 0.53
SCAMP4-204ENST00000414057 F8W810 466 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms