RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 EMC2Q15006 297 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 LINC01559Q495D7 138 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 NCAPH2Q6IBW4 605 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 FUT10Q6P4F1 479 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 ELMSAN1Q6PJG2 1045 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 DCLRE1AQ6PJP8 1040 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 CYP26C1Q6V0L0 522 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 PALB2Q86YC2 1186 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 C1orf210Q8IVY1 113 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 MAML2Q8IZL2 1156 aaPredicted RBP9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 RNF149Q8NC42 400 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 PJA1Q8NG27 643 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 PRPF31Q8WWY3 499 aaKnown RBP9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 SLC7A3Q8WY07 619 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 CPB2Q96IY4 423 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 CEP170P1Q96L14 293 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 FAM20AQ96MK3 541 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 JPH2Q9BR39 696 aaPredicted RBP9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 RPP25Q9BUL9 199 aaKnown RBP9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 APOL6Q9BWW8 343 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 GPR62Q9BZJ7 368 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 NT5C3AQ9H0P0 336 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 NXF3Q9H4D5 531 aaKnown RBP9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 DHX33Q9H6R0 707 aaKnown RBP9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 PIDD1Q9HB75 910 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 KCNMB3Q9NPA1 279 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 SLC2A4RGQ9NR83 387 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 MIOSQ9NXC5 875 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 KANSL3Q9P2N6 904 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 CACNG4Q9UBN1 327 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 SEPT3Q9UH03 358 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 SSX2IPQ9Y2D8 614 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 SIT1Q9Y3P8 196 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 PCDHGA11Q9Y5H2 935 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 PDCD11Q14690 1871 aaKnown RBP9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 MAP1BP46821 2468 aaKnown RBP9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 FRYLO94915 3013 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 EPG5Q9HCE0 2579 aa9.14□□□□□ -0.95
UPF3AP1-201ENST00000413731 F5P12259 2224 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 ACACBO00763 2458 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 TICRRQ7Z2Z1 1910 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 WNT7AO00755 349 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 QARSP47897 775 aaKnown RBP9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 TRAPPC10P48553 1259 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 NTHL1P78549 312 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 PPP2R5CQ13362 524 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 PUM1Q14671 1186 aaKnown RBP eCLIP9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 LARP1BQ659C4 914 aaKnown RBP9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 FERMT3Q86UX7 667 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 BAP1Q92560 729 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 RUBCNQ92622 972 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 RABGGTAQ92696 567 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 SNX21Q969T3 373 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 NXPE3Q969Y0 559 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 LXNQ9BS40 222 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 XPNPEP1Q9NQW7 623 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 CHST7Q9NS84 486 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 ZDHHC7Q9NXF8 308 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 DLL3Q9NYJ7 618 aa9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 DNMT3AQ9Y6K1 912 aaPredicted RBP9.13□□□□□ -0.95
UPF3AP1-201ENST00000413731 HRO43593 1189 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 GAS2O43903 313 aaKnown RBP9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 OR52Z1P0C646 297 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 U2AF2P26368 475 aaKnown RBP eCLIP9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 TXKP42681 527 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 RAB15P59190 212 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 CYP4A11Q02928 519 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 ORC2Q13416 577 aaPredicted RBP9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 ZNF174Q15697 407 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 RSPO4Q2I0M5 234 aaPredicted RBP9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 RTP2Q5QGT7 225 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 NOTUMQ6P988 496 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 PRSS55Q6UWB4 352 aaPredicted RBP9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 PARM1Q6UWI2 310 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 SUMF1Q8NBK3 374 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 TSEN2Q8NCE0 465 aaKnown RBP9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 CNNM3Q8NE01 707 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 GSTCDQ8NEC7 633 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 ASAP3Q8TDY4 903 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 HASPINQ8TF76 798 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 HDAC7Q8WUI4 952 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 HAS1Q92839 578 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 FGF14Q92915 247 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 CCDC51Q96ER9 411 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 INTS4Q96HW7 963 aaKnown RBP9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 CCDC43Q96MW1 224 aaKnown RBP9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 ASB16Q96NS5 453 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 MTRQ99707 1265 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 PRKD2Q9BZL6 878 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 PLEKHA4Q9H4M7 779 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 TTC12Q9H892 705 aaPredicted RBP9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 DPP7Q9UHL4 492 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 FBXW11Q9UKB1 542 aa9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 MTF2Q9Y483 593 aaPredicted RBP9.12□□□□□ -0.95
UPF3AP1-201ENST00000413731 CITO14578 2027 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 INO80B-WBP1J3KQ70 363 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 ZBTB39O15060 712 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 B4GALT5O43286 388 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 DKC1O60832 514 aaKnown RBP eCLIP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms