RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 SLC8B1Q6J4K2 584 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 SYCE2Q6PIF2 218 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 SHC4Q6S5L8 630 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 DPH6Q7L8W6 267 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 OTOP3Q7RTS5 596 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 DYMQ7RTS9 669 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 BMP8AQ7Z5Y6 402 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 USP37Q86T82 979 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 CDR2LQ86X02 465 aaPredicted RBP6.95□□□□□ -1.3
USP54-202ENST00000413442 C12orf56Q8IXR9 622 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 ZDHHC14Q8IZN3 488 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 LNX1Q8TBB1 728 aaPredicted RBP6.95□□□□□ -1.3
USP54-202ENST00000413442 POMGNT1Q8WZA1 660 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 SUSD3Q96L08 255 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 MSTO1Q9BUK6 570 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 KIFC3Q9BVG8 833 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 GPR62Q9BZJ7 368 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 POLD4Q9HCU8 107 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 FOXD4L1Q9NU39 408 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 MARCH5Q9NX47 278 aa6.95□□□□□ -1.3
USP54-202ENST00000413442 CIZ1Q9ULV3 898 aaPredicted RBP6.95□□□□□ -1.3
USP54-202ENST00000413442 PRG3Q9Y2Y8 225 aaPredicted RBP6.95□□□□□ -1.3
USP54-202ENST00000413442 R3HCC1Q9Y3T6 440 aaKnown RBP6.95□□□□□ -1.3
USP54-202ENST00000413442 NPHP3-ACAD11A0A0J9YXS1 232 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 GOLGA6L4A6NEF3 574 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 ZNF233A6NK53 670 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 OR6C75A6NL08 312 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 SOBPA7XYQ1 873 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 LACTBL1A8MY62 500 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 PODXLO00592 558 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 EXTL3O43909 919 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 XYLBO75191 536 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 ZMYND10O75800 440 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 ABLIM3O94929 683 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 GCNT3O95395 438 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 ATF2P15336 505 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 NMT1P30419 496 aaKnown RBP6.94□□□□□ -1.3
USP54-202ENST00000413442 ELF1P32519 619 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 SSTR3P32745 418 aaPredicted RBP6.94□□□□□ -1.3
USP54-202ENST00000413442 CA8P35219 290 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 PBX3P40426 434 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 PPP1R2P41236 205 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 AARSP49588 968 aaKnown RBP eCLIP6.94□□□□□ -1.3
USP54-202ENST00000413442 DNM1Q05193 864 aaKnown RBP6.94□□□□□ -1.3
USP54-202ENST00000413442 DLX2Q07687 328 aaPredicted RBP6.94□□□□□ -1.3
USP54-202ENST00000413442 PSMD5Q16401 504 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 SPECC1Q5M775 1068 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 HS2ST1Q7LGA3 356 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 ZBTB33Q86T24 672 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 TMEM173Q86WV6 379 aaPredicted RBP6.94□□□□□ -1.3
USP54-202ENST00000413442 SFR1Q86XK3 245 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 UBALD2Q8IYN6 164 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 PDILTQ8N807 584 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 LEMD2Q8NC56 503 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 KREMEN2Q8NCW0 462 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 LEO1Q8WVC0 666 aaPredicted RBP6.94□□□□□ -1.3
USP54-202ENST00000413442 RIN2Q8WYP3 895 aaPredicted RBP6.94□□□□□ -1.3
USP54-202ENST00000413442 DHX58Q96C10 678 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 ZBTB45Q96K62 511 aaPredicted RBP6.94□□□□□ -1.3
USP54-202ENST00000413442 CEP295NLQ96MC4 621 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 TIGD1Q96MW7 591 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 PRRX2Q99811 253 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 PANK2Q9BZ23 570 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 PRKD2Q9BZL6 878 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 GPR88Q9GZN0 384 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 AVENQ9NQS1 362 aaPredicted RBP6.94□□□□□ -1.3
USP54-202ENST00000413442 IGSF9Q9P2J2 1179 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 ANKFY1Q9P2R3 1169 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 HCSTQ9UBK5 93 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 MTRRQ9UBK8 725 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 ZMYM5Q9UJ78 669 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 PCDHB8Q9UN66 801 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 HPSEQ9Y251 543 aa6.94□□□□□ -1.3
USP54-202ENST00000413442 USP15Q9Y4E8 981 aaPredicted RBP6.94□□□□□ -1.3
USP54-202ENST00000413442 MYO7AQ13402 2215 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 CCDC195A0A1B0GUA6 201 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 ANO9A1A5B4 782 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 CASTOR2A6NHX0 329 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 SPDYE4A6NLX3 237 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 PIRO00625 290 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 PDXKO00764 312 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 ZNF197O14709 1029 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 LINC01565O15544 149 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 DCXO43602 365 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 FAM189A1O60320 539 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 TBC1D4O60343 1298 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 KIF4AO95239 1232 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 FGF19O95750 216 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 CYP11A1P05108 521 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 EDN1P05305 212 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 IL9P15248 144 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 GTF2F1P35269 517 aaKnown RBP eCLIP6.93□□□□□ -1.3
USP54-202ENST00000413442 SYKP43405 635 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 LILRA4P59901 499 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 OSTNP61366 133 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 ASIC1P78348 528 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 EHHADHQ08426 723 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 PLD1Q13393 1074 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 KCNB1Q14721 858 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 TMEM132DQ14C87 1099 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms