RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 I3L4J1 428 aa20.51■□□□□ 0.87
TRIM56-202ENST00000412507 PRPF6O94906 941 aaKnown RBP20.51■□□□□ 0.87
TRIM56-202ENST00000412507 AFMP43652 599 aa20.51■□□□□ 0.87
TRIM56-202ENST00000412507 ACOT2P49753 483 aa20.51■□□□□ 0.87
TRIM56-202ENST00000412507 ALCAMQ13740 583 aa20.51■□□□□ 0.87
TRIM56-202ENST00000412507 PSMD5Q16401 504 aa20.51■□□□□ 0.87
TRIM56-202ENST00000412507 CES5AQ6NT32 575 aa20.51■□□□□ 0.87
TRIM56-202ENST00000412507 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.51■□□□□ 0.87
TRIM56-202ENST00000412507 GLIS3Q8NEA6 775 aa20.51■□□□□ 0.87
TRIM56-202ENST00000412507 LNX1Q8TBB1 728 aaPredicted RBP20.51■□□□□ 0.87
TRIM56-202ENST00000412507 FEZF2Q8TBJ5 459 aa20.51■□□□□ 0.87
TRIM56-202ENST00000412507 PIK3R5Q8WYR1 880 aa20.51■□□□□ 0.87
TRIM56-202ENST00000412507 KHSRPQ92945 711 aaKnown RBP eCLIP20.51■□□□□ 0.87
TRIM56-202ENST00000412507 FAM212AQ96EL1 285 aa20.51■□□□□ 0.87
TRIM56-202ENST00000412507 BLZF1Q9H2G9 400 aa20.51■□□□□ 0.87
TRIM56-202ENST00000412507 ADAM7Q9H2U9 754 aa20.51■□□□□ 0.87
TRIM56-202ENST00000412507 SERTAD1Q9UHV2 236 aa20.51■□□□□ 0.87
TRIM56-202ENST00000412507 AGO2Q9UKV8 859 aaKnown RBP20.51■□□□□ 0.87
TRIM56-202ENST00000412507 SPDYE4A6NLX3 237 aa20.5■□□□□ 0.87
TRIM56-202ENST00000412507 GLUD1P00367 558 aa20.5■□□□□ 0.87
TRIM56-202ENST00000412507 ADRB2P07550 413 aa20.5■□□□□ 0.87
TRIM56-202ENST00000412507 WEE2P0C1S8 567 aa20.5■□□□□ 0.87
TRIM56-202ENST00000412507 SPATA31D3P0C874 917 aa20.5■□□□□ 0.87
TRIM56-202ENST00000412507 FGFR3P22607 806 aa20.5■□□□□ 0.87
TRIM56-202ENST00000412507 ADSSP30520 456 aa20.5■□□□□ 0.87
TRIM56-202ENST00000412507 RPL9P32969 192 aaKnown RBP20.5■□□□□ 0.87
TRIM56-202ENST00000412507 ITIH3Q06033 890 aa20.5■□□□□ 0.87
TRIM56-202ENST00000412507 CBX2Q14781 532 aaPredicted RBP20.5■□□□□ 0.87
TRIM56-202ENST00000412507 CNNM4Q6P4Q7 775 aa20.5■□□□□ 0.87
TRIM56-202ENST00000412507 SPATA31D4Q6ZUB0 917 aa20.5■□□□□ 0.87
TRIM56-202ENST00000412507 GRAMD1CQ8IYS0 662 aa20.5■□□□□ 0.87
TRIM56-202ENST00000412507 SYCP3Q8IZU3 236 aa20.5■□□□□ 0.87
TRIM56-202ENST00000412507 POMGNT1Q8WZA1 660 aa20.5■□□□□ 0.87
TRIM56-202ENST00000412507 POP1Q99575 1024 aaKnown RBP20.5■□□□□ 0.87
TRIM56-202ENST00000412507 PHF7Q9BWX1 381 aaPredicted RBP20.5■□□□□ 0.87
TRIM56-202ENST00000412507 MAN1C1Q9NR34 630 aa20.5■□□□□ 0.87
TRIM56-202ENST00000412507 TRAPPC3O43617 180 aa20.49■□□□□ 0.87
TRIM56-202ENST00000412507 PFKFB1P16118 471 aa20.49■□□□□ 0.87
TRIM56-202ENST00000412507 CMA1P23946 247 aa20.49■□□□□ 0.87
TRIM56-202ENST00000412507 TKTP29401 623 aaKnown RBP20.49■□□□□ 0.87
TRIM56-202ENST00000412507 CREMQ03060 361 aa20.49■□□□□ 0.87
TRIM56-202ENST00000412507 POSTNQ15063 836 aa20.49■□□□□ 0.87
TRIM56-202ENST00000412507 ZBTB6Q15916 424 aa20.49■□□□□ 0.87
TRIM56-202ENST00000412507 TMC5Q6UXY8 1006 aa20.49■□□□□ 0.87
TRIM56-202ENST00000412507 CEP57L1Q8IYX8 460 aa20.49■□□□□ 0.87
TRIM56-202ENST00000412507 CLSTN3Q9BQT9 956 aa20.49■□□□□ 0.87
TRIM56-202ENST00000412507 PYM1Q9BRP8 204 aaKnown RBP20.49■□□□□ 0.87
TRIM56-202ENST00000412507 SCAND2PQ9GZW5 306 aaPredicted RBP20.49■□□□□ 0.87
TRIM56-202ENST00000412507 UBQLN1Q9UMX0 589 aaKnown RBP20.49■□□□□ 0.87
TRIM56-202ENST00000412507 TSC2P49815 1807 aa20.48■□□□□ 0.87
TRIM56-202ENST00000412507 TGM5O43548 720 aa20.48■□□□□ 0.87
TRIM56-202ENST00000412507 GUCY2FP51841 1108 aa20.48■□□□□ 0.87
TRIM56-202ENST00000412507 CUL4BQ13620 913 aa20.48■□□□□ 0.87
TRIM56-202ENST00000412507 JADE1Q6IE81 842 aa20.48■□□□□ 0.87
TRIM56-202ENST00000412507 CRELD2Q6UXH1 353 aaPredicted RBP20.48■□□□□ 0.87
TRIM56-202ENST00000412507 UNC13DQ70J99 1090 aa20.48■□□□□ 0.87
TRIM56-202ENST00000412507 CD302Q8IX05 232 aa20.48■□□□□ 0.87
TRIM56-202ENST00000412507 ZSWIM2Q8NEG5 633 aa20.48■□□□□ 0.87
TRIM56-202ENST00000412507 RPGRIP1Q96KN7 1286 aa20.48■□□□□ 0.87
TRIM56-202ENST00000412507 SFXN1Q9H9B4 322 aa20.48■□□□□ 0.87
TRIM56-202ENST00000412507 GDPD2Q9HCC8 539 aa20.48■□□□□ 0.87
TRIM56-202ENST00000412507 HPSEQ9Y251 543 aa20.48■□□□□ 0.87
TRIM56-202ENST00000412507 NUB1Q9Y5A7 615 aa20.48■□□□□ 0.87
TRIM56-202ENST00000412507 DOCK8Q8NF50 2099 aa20.48■□□□□ 0.87
TRIM56-202ENST00000412507 ADAM12O43184 909 aa20.47■□□□□ 0.87
TRIM56-202ENST00000412507 ACTN4O43707 911 aaKnown RBP20.47■□□□□ 0.87
TRIM56-202ENST00000412507 SLFN14P0C7P3 912 aa20.47■□□□□ 0.87
TRIM56-202ENST00000412507 CYP3A5P20815 502 aa20.47■□□□□ 0.87
TRIM56-202ENST00000412507 LRPAP1P30533 357 aa20.47■□□□□ 0.87
TRIM56-202ENST00000412507 MTHFRP42898 656 aa20.47■□□□□ 0.87
TRIM56-202ENST00000412507 FAM26FQ5R3K3 315 aa20.47■□□□□ 0.87
TRIM56-202ENST00000412507 PDXDC1Q6P996 788 aa20.47■□□□□ 0.87
TRIM56-202ENST00000412507 LILRA6Q6PI73 481 aa20.47■□□□□ 0.87
TRIM56-202ENST00000412507 STXBP4Q6ZWJ1 553 aa20.47■□□□□ 0.87
TRIM56-202ENST00000412507 SAAL1Q96ER3 474 aa20.47■□□□□ 0.87
TRIM56-202ENST00000412507 RIPOR3Q96MK2 946 aa20.47■□□□□ 0.87
TRIM56-202ENST00000412507 POMKQ9H5K3 350 aa20.47■□□□□ 0.87
TRIM56-202ENST00000412507 TMEM206Q9H813 350 aa20.47■□□□□ 0.87
TRIM56-202ENST00000412507 LOC730098B7Z3J9 87 aa20.46■□□□□ 0.87
TRIM56-202ENST00000412507 XPOTO43592 962 aaKnown RBP20.46■□□□□ 0.87
TRIM56-202ENST00000412507 NFICP08651 508 aa20.46■□□□□ 0.87
TRIM56-202ENST00000412507 GARTP22102 1010 aa20.46■□□□□ 0.87
TRIM56-202ENST00000412507 SP100P23497 879 aaPredicted RBP20.46■□□□□ 0.87
TRIM56-202ENST00000412507 MCM4P33991 863 aa20.46■□□□□ 0.87
TRIM56-202ENST00000412507 NUCB2P80303 420 aa20.46■□□□□ 0.87
TRIM56-202ENST00000412507 ATAT1Q5SQI0 421 aa20.46■□□□□ 0.87
TRIM56-202ENST00000412507 NECTIN4Q96NY8 510 aa20.46■□□□□ 0.87
TRIM56-202ENST00000412507 TSPAN18Q96SJ8 248 aa20.46■□□□□ 0.87
TRIM56-202ENST00000412507 CBWD1Q9BRT8 395 aa20.46■□□□□ 0.87
TRIM56-202ENST00000412507 PCIF1Q9H4Z3 704 aa20.46■□□□□ 0.87
TRIM56-202ENST00000412507 ASB7Q9H672 318 aa20.46■□□□□ 0.87
TRIM56-202ENST00000412507 EPHX3Q9H6B9 360 aa20.46■□□□□ 0.87
TRIM56-202ENST00000412507 MTRRQ9UBK8 725 aa20.46■□□□□ 0.87
TRIM56-202ENST00000412507 DPP7Q9UHL4 492 aa20.46■□□□□ 0.87
TRIM56-202ENST00000412507 C1RP00736 705 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 OR1D2P34982 312 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 HOXD13P35453 343 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 EHHADHQ08426 723 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 TMEM132DQ14C87 1099 aa20.45■□□□□ 0.86
TRIM56-202ENST00000412507 SPATA1Q5VX52 437 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms