RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 HOXA9P31269 272 aa18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 SPAG1Q07617 926 aa18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 ANGPT1Q15389 498 aa18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 VARS2Q5ST30 1063 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 NPAS3Q8IXF0 933 aa18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 DRC1Q96MC2 740 aa18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 RAB34Q9BZG1 259 aa18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 PLA2G2FQ9BZM2 168 aa18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 FOXQ1Q9C009 403 aa18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 TUBGCP4Q9UGJ1 667 aa18.07■□□□□ 0.48
SCAMP4-203ENST00000411971 PLS3P13797 630 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 TNFSF9P41273 254 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 MRPL58Q14197 206 aaKnown RBP18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 RILPL1Q5EBL4 403 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 ZBTB41Q5SVQ8 909 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 SPIRE2Q8WWL2 714 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 NXPE3Q969Y0 559 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 UROC1Q96N76 676 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 ACAP3Q96P50 834 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 KXD1Q9BQD3 176 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 RTP3Q9BQQ7 232 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 ARHGEF3Q9NR81 526 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 SLC2A4RGQ9NR83 387 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 ANKFY1Q9P2R3 1169 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 STK24Q9Y6E0 443 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 COL4A2P08572 1712 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 GVINP1Q7Z2Y8 2422 aa18.06■□□□□ 0.48
SCAMP4-203ENST00000411971 TSC2P49815 1807 aa18.05■□□□□ 0.48
SCAMP4-203ENST00000411971 ABLIM3O94929 683 aa18.05■□□□□ 0.48
SCAMP4-203ENST00000411971 PLA2G4BP0C869 781 aa18.05■□□□□ 0.48
SCAMP4-203ENST00000411971 YARSP54577 528 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-203ENST00000411971 SPECC1Q5M775 1068 aa18.05■□□□□ 0.48
SCAMP4-203ENST00000411971 SLC8B1Q6J4K2 584 aa18.05■□□□□ 0.48
SCAMP4-203ENST00000411971 ANKS3Q6ZW76 656 aa18.05■□□□□ 0.48
SCAMP4-203ENST00000411971 TCEAL4Q96EI5 215 aa18.05■□□□□ 0.48
SCAMP4-203ENST00000411971 TCHPQ9BT92 498 aa18.05■□□□□ 0.48
SCAMP4-203ENST00000411971 IRF2BPLQ9H1B7 796 aa18.05■□□□□ 0.48
SCAMP4-203ENST00000411971 BLOC1S4Q9NUP1 217 aa18.05■□□□□ 0.48
SCAMP4-203ENST00000411971 MTF2Q9Y483 593 aaPredicted RBP18.05■□□□□ 0.48
SCAMP4-203ENST00000411971 RBM19Q9Y4C8 960 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-203ENST00000411971 SCN1AP35498 2009 aa18.05■□□□□ 0.48
SCAMP4-203ENST00000411971 ZNF292O60281 2723 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 SHISA7A6NL88 538 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 STK25O00506 426 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 FAM189A1O60320 539 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 VNN2O95498 520 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 POU2F2P09086 479 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 CXCL8P10145 99 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 CEBPBP17676 345 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 CCR2P41597 374 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 GUCY2FP51841 1108 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 ARPP19P56211 112 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 UVSSAQ2YD98 709 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 PABPC1LQ4VXU2 614 aaKnown RBP18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 PDXDC1Q6P996 788 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 C17orf75Q9HAS0 396 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 TOPORSQ9NS56 1045 aaPredicted RBP18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 FBXL5Q9UKA1 691 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 DMXL1Q9Y485 3027 aa18.04■□□□□ 0.48
SCAMP4-203ENST00000411971 ARHGEF37A1IGU5 675 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 PPEF2O14830 753 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 XYLBO75191 536 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 TOM1L1O75674 476 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 RHOP08100 348 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 NCKAP1LP55160 1127 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 MCL1Q07820 350 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 SNW1Q13573 536 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 NOLC1Q14978 699 aaKnown RBP eCLIP18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 PRSS36Q5K4E3 855 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 PHLDB3Q6NSJ2 640 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 SLC39A4Q6P5W5 647 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 ZNF461Q8TAF7 563 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 MCRS1Q96EZ8 462 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 SUSD3Q96L08 255 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 TBC1D32Q96NH3 1257 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 FIZ1Q96SL8 496 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 REEP2Q9BRK0 252 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 IKZF4Q9H2S9 585 aa18.03■□□□□ 0.48
SCAMP4-203ENST00000411971 EP300Q09472 2414 aaPredicted RBP18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 NCANO14594 1321 aa18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 TICRRQ7Z2Z1 1910 aa18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 TTC26A0AVF1 554 aa18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 MOSPD3O75425 235 aa18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 CD72P21854 359 aa18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 FCARP24071 287 aa18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 STARD6P59095 220 aa18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 DHX8Q14562 1220 aaKnown RBP18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 ZBTB6Q15916 424 aa18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 HAUS6Q7Z4H7 955 aa18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 MAML2Q8IZL2 1156 aaPredicted RBP18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 HS6ST3Q8IZP7 471 aa18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 TIPINQ9BVW5 301 aa18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 SLC38A7Q9NVC3 462 aa18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 TIMM13Q9Y5L4 95 aaPredicted RBP18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 ZFP37Q9Y6Q3 630 aaPredicted RBP18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 R4GN57 208 aa18.02■□□□□ 0.48
SCAMP4-203ENST00000411971 TISP43B9A030 160 aa18.01■□□□□ 0.47
SCAMP4-203ENST00000411971 SYN3O14994 580 aa18.01■□□□□ 0.47
SCAMP4-203ENST00000411971 TRAPPC3O43617 180 aa18.01■□□□□ 0.47
SCAMP4-203ENST00000411971 ATF2P15336 505 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms