RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 H0Y3Z8 333 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 DDNO94850 711 aaPredicted RBP16.44■□□□□ 0.22
LIMS2-205ENST00000409455 GM2AP17900 193 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 RFX1P22670 979 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 RPA1P27694 616 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 RPS6KA3P51812 740 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 MYL7Q01449 175 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 RNASELQ05823 741 aaKnown RBP16.44■□□□□ 0.22
LIMS2-205ENST00000409455 KYNUQ16719 465 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 CBWD6Q4V339 395 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 CBWD3Q5JTY5 395 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 CBWD5Q5RIA9 395 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 SAMD1Q6SPF0 538 aaPredicted RBP16.44■□□□□ 0.22
LIMS2-205ENST00000409455 LONP2Q86WA8 852 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 GALNT15Q8N3T1 639 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 SLCO2A1Q92959 643 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 MKNK1Q9BUB5 465 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 TBC1D10AQ9BXI6 508 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 KIAA1683Q9H0B3 1180 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 GLT8D2Q9H1C3 349 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 FBXO28Q9NVF7 368 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 FZD1Q9UP38 647 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 TGFB1I1O43294 461 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 LMNAP02545 664 aaKnown RBP16.44■□□□□ 0.22
LIMS2-205ENST00000409455 DLATP10515 647 aaKnown RBP16.44■□□□□ 0.22
LIMS2-205ENST00000409455 BCRP11274 1271 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 FOXN2P32314 431 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 TUBP50607 506 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 SIX1Q15475 284 aaPredicted RBP16.44■□□□□ 0.22
LIMS2-205ENST00000409455 SEPT14Q6ZU15 432 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 SH3TC2Q8TF17 1288 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 CHURC1Q8WUH1 139 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 SLC20A1Q8WUM9 679 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 P2RX7Q99572 595 aaKnown RBP16.44■□□□□ 0.22
LIMS2-205ENST00000409455 POP1Q99575 1024 aaKnown RBP16.44■□□□□ 0.22
LIMS2-205ENST00000409455 SYT15Q9BQS2 421 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 CCDC77Q9BR77 488 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 RUSC1Q9BVN2 902 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 DNAJC17Q9NVM6 304 aaKnown RBP16.44■□□□□ 0.22
LIMS2-205ENST00000409455 CHKBQ9Y259 395 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 ASB3Q9Y575 518 aa16.44■□□□□ 0.22
LIMS2-205ENST00000409455 FAM47DPA6NHR8 397 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 TP73O15350 636 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 RTN3O95197 1032 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-205ENST00000409455 GCLCP48506 637 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-205ENST00000409455 PDCD2Q16342 344 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-205ENST00000409455 SGO2Q562F6 1265 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 RHBDF2Q6PJF5 856 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 CYP4X1Q8N118 509 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 RBBP8NLQ8NC74 664 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-205ENST00000409455 CD101Q93033 1021 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 PLVAPQ9BX97 442 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 OLFML3Q9NRN5 406 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 GGA3Q9NZ52 723 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 RPL26L1Q9UNX3 145 aaKnown RBP16.43■□□□□ 0.22
LIMS2-205ENST00000409455 FRMD4BQ9Y2L6 1034 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 FOXN3O00409 490 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-205ENST00000409455 EIF3DO15371 548 aaKnown RBP eCLIP16.43■□□□□ 0.22
LIMS2-205ENST00000409455 DGKZQ13574 1117 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 ZNF449Q6P9G9 518 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 ZFAND2BQ8WV99 257 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 BHMT2Q9H2M3 363 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 DCLRE1BQ9H816 532 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 PHTF1Q9UMS5 762 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 NAALADL1Q9UQQ1 740 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 C2CD2Q9Y426 696 aa16.43■□□□□ 0.22
LIMS2-205ENST00000409455 RASA4BC9J798 803 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 RASA4O43374 803 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 TRIM49P0CI25 452 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 TRIM49CP0CI26 452 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 SPATA31C1P0DKV0 1188 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 YBX3P16989 372 aaKnown RBP eCLIP16.42■□□□□ 0.22
LIMS2-205ENST00000409455 GAP43P17677 238 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 EPHB2P29323 1055 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 CAV1Q03135 178 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 SPIRE1Q08AE8 756 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 DNAJC3Q13217 504 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 CCDC174Q6PII3 467 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 APOBEC3FQ8IUX4 373 aaKnown RBP16.42■□□□□ 0.22
LIMS2-205ENST00000409455 ZMYM2Q9UBW7 1377 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 CYP3A7-CYP3A51PA0A087WV96 503 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 SP100P23497 879 aaPredicted RBP16.42■□□□□ 0.22
LIMS2-205ENST00000409455 CYP3A7P24462 503 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 ITGA8P53708 1063 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 SNX1Q13596 522 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 NFIL3Q16649 462 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 IRGCQ6NXR0 463 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 SYDE1Q6ZW31 735 aaPredicted RBP16.42■□□□□ 0.22
LIMS2-205ENST00000409455 HS2ST1Q7LGA3 356 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 ANO3Q9BYT9 981 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 NINJ2Q9NZG7 142 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 RNF181Q9P0P0 153 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 DLGAP2Q9P1A6 1054 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 STOML1Q9UBI4 398 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 CHORDC1Q9UHD1 332 aaPredicted RBP16.42■□□□□ 0.22
LIMS2-205ENST00000409455 STK24Q9Y6E0 443 aa16.42■□□□□ 0.22
LIMS2-205ENST00000409455 NVLO15381 856 aaKnown RBP16.41■□□□□ 0.22
LIMS2-205ENST00000409455 MYBL1P10243 752 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 ATF2P15336 505 aa16.41■□□□□ 0.22
LIMS2-205ENST00000409455 HOXA13P31271 388 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms