RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 TGFBRAP1Q8WUH2 860 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 NAT14Q8WUY8 206 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 ARHGEF2Q92974 986 aaKnown RBP11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 TGS1Q96RS0 853 aaKnown RBP11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 NACAP1Q9BZK3 213 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 LRRC27Q9C0I9 530 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 TMEM60Q9H2L4 133 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 BHMT2Q9H2M3 363 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 UBN1Q9NPG3 1134 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 HSFX1Q9UBD0 423 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 ANGPTL2Q9UKU9 493 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 CHKBQ9Y259 395 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 PCDHA3Q9Y5H8 950 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 TLDC2A0PJX2 215 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 CCDC22O60826 627 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 ITGA4P13612 1032 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 PDE6AP16499 860 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 GTF2A2P52657 109 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 HADHBP55084 474 aaKnown RBP11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 PPP4CP60510 307 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 HPCAP84074 193 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 NR1H3Q13133 447 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 TCEAL1Q15170 157 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 NOL9Q5SY16 702 aaKnown RBP11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 MAEAQ7L5Y9 396 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 JAMLQ86YT9 394 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 DAGLBQ8NCG7 672 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 WDR60Q8WVS4 1066 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 ART4Q93070 314 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 TSG101Q99816 390 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 POLR3CQ9BUI4 534 aaPredicted RBP11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 PITPNM3Q9BZ71 974 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 DNAJC18Q9H819 358 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 AMFRQ9UKV5 643 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 BARX2Q9UMQ3 279 aaPredicted RBP11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 PACSIN2Q9UNF0 486 aaPredicted RBP11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 TMED5Q9Y3A6 229 aa11.31□□□□□ -0.6
NIF3L1-204ENST00000409357 DDX3XO00571 662 aaKnown RBP eCLIP11.3□□□□□ -0.67e-8■■■■□ 19.5
NIF3L1-204ENST00000409357 C2CD2LO14523 706 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 MBD4O95243 580 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 PSMG1O95456 288 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 ALDH1A1P00352 501 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 VAV1P15498 845 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 ZNF24P17028 368 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 EIF4BP23588 611 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 CRABP2P29373 138 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 GJA8P48165 433 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 EVX2Q03828 476 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 PPATQ06203 517 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 CBX3Q13185 183 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 CYP1B1Q16678 543 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 WDR72Q3MJ13 1102 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 KHDC1Q4VXA5 237 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 CCDC92Q53HC0 331 aaPredicted RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 C3orf62Q6ZUJ4 267 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 TMTC3Q6ZXV5 915 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 DAAM2Q86T65 1068 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 ZC3H3Q8IXZ2 948 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 KIAA0895Q8NCT3 520 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 FBXO25Q8TCJ0 367 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 CTNNBL1Q8WYA6 563 aaPredicted RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 ESR2Q92731 530 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 SLCO2A1Q92959 643 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 DGCR14Q96DF8 476 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 DDX27Q96GQ7 796 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 TUBGCP5Q96RT8 1024 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 KIAA1683Q9H0B3 1180 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 BRD8Q9H0E9 1235 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 GANQ9H2C0 597 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 SEMA4AQ9H3S1 761 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 EPB41L4AQ9HCS5 686 aaPredicted RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 STK17AQ9UEE5 414 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 SAP30BPQ9UHR5 308 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 NAGPAQ9UK23 515 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 NCANO14594 1321 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 FRMPD4Q14CM0 1322 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 ZNF532Q9HCE3 1301 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 BAZ2AQ9UIF9 1905 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 PHF2O75151 1096 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 CYP1A1P04798 512 aaPredicted RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 FGRP09769 529 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 PTPRAP18433 802 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 SMARCA1P28370 1054 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 STX2P32856 288 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 MAGEA10P43363 369 aaPredicted RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 RAP1GDS1P52306 607 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 RNASE9P60153 205 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 JAG1P78504 1218 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 FKBP3Q00688 224 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 SNAPC2Q13487 334 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 PFKFB3Q16875 520 aaPredicted RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 ACAD11Q709F0 780 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 IRF2BP2Q7Z5L9 587 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 CTU1Q7Z7A3 348 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 ZC3H18Q86VM9 953 aaKnown RBP11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 SCYL3Q8IZE3 742 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 ARHGAP24Q8N264 748 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 SLC17A8Q8NDX2 589 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 TTC8Q8TAM2 541 aa11.3□□□□□ -0.6
NIF3L1-204ENST00000409357 NRG4Q8WWG1 115 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms