RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 FGFR4P22455 802 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 DRAP1Q14919 205 aaPredicted RBP12.73□□□□□ -0.37
SHANK2-203ENST00000409161 KLHL12Q53G59 568 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 THEMIS2Q5TEJ8 643 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 KRT84Q9NSB2 600 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 CDH6P55285 790 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 KCNK10P57789 538 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 MAPRE1Q15691 268 aaKnown RBP12.73□□□□□ -0.37
SHANK2-203ENST00000409161 DGKHQ86XP1 1220 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 SENP7Q9BQF6 1050 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 UNC45AQ9H3U1 944 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 MKL2Q9ULH7 1088 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 CAMSAP1Q5T5Y3 1602 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 TBKBP1A7MCY6 615 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 EIF3EP60228 445 aaKnown RBP12.73□□□□□ -0.37
SHANK2-203ENST00000409161 RNF135Q8IUD6 432 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 HEMGNQ9BXL5 484 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 DDX47Q9H0S4 455 aaKnown RBP12.73□□□□□ -0.37
SHANK2-203ENST00000409161 KCND2Q9NZV8 630 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 CTNNAL1Q9UBT7 734 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 ANKARQ7Z5J8 1434 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 CENPXA8MT69 81 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 ENO3P13929 434 aaPredicted RBP12.73□□□□□ -0.37
SHANK2-203ENST00000409161 SPRP35270 261 aaPredicted RBP12.73□□□□□ -0.37
SHANK2-203ENST00000409161 CAPZA2P47755 286 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 MTMR1Q13613 665 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 RBM15Q96T37 977 aaKnown RBP eCLIP12.73□□□□□ -0.37
SHANK2-203ENST00000409161 RHOBTB1O94844 696 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 PEX3P56589 373 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 CDK17Q00537 523 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 ILF2Q12905 390 aaKnown RBP12.73□□□□□ -0.37
SHANK2-203ENST00000409161 AATKQ6ZMQ8 1374 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 PRCPP42785 496 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 DUOXA2Q1HG44 320 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 SGSM1Q2NKQ1 1148 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 TMC5Q6UXY8 1006 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 RASGRP2Q7LDG7 609 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 PTPRN2Q92932 1015 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 ERP27Q96DN0 273 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.73□□□□□ -0.371e-7■■■□□ 18.9
SHANK2-203ENST00000409161 PLEKHG2Q9H7P9 1386 aa12.73□□□□□ -0.37
SHANK2-203ENST00000409161 POTEFA5A3E0 1075 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 PEX5P50542 639 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 ZNF568Q3ZCX4 644 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 FAM102AQ5T9C2 384 aaPredicted RBP12.72□□□□□ -0.37
SHANK2-203ENST00000409161 LINC00523Q86TU6 105 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 SFR1Q86XK3 245 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 SPATA16Q9BXB7 569 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 DYRK4Q9NR20 520 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 GRID1Q9ULK0 1009 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 RXRGP48443 463 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 DHX40Q8IX18 779 aaKnown RBP12.72□□□□□ -0.37
SHANK2-203ENST00000409161 FRMD8P1Q9BZ68 369 aaPredicted RBP12.72□□□□□ -0.37
SHANK2-203ENST00000409161 FAM192AQ9GZU8 254 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 DCLRE1BQ9H816 532 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 HDAC6Q9UBN7 1215 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 CHMP2BQ9UQN3 213 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 RGS5O15539 181 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 POLBP06746 335 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 GTF2H3Q13889 308 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 FBXW10Q5XX13 1052 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 EDC3Q96F86 508 aaKnown RBP12.72□□□□□ -0.37
SHANK2-203ENST00000409161 SPATA17Q96L03 361 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 ZNF560Q96MR9 790 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 PIGSQ96S52 555 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 MYO3BQ8WXR4 1341 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 UBA6A0AVT1 1052 aaPredicted RBP12.72□□□□□ -0.37
SHANK2-203ENST00000409161 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.72□□□□□ -0.37
SHANK2-203ENST00000409161 KCNN4O15554 427 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 FAM45AQ8TCE6 357 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 KLHL4Q9C0H6 718 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 ZBTB5O15062 677 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 APRTP07741 180 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 CTCFP49711 727 aaPredicted RBP12.72□□□□□ -0.37
SHANK2-203ENST00000409161 FOXD4Q12950 439 aaPredicted RBP12.72□□□□□ -0.37
SHANK2-203ENST00000409161 QKIQ96PU8 341 aaKnown RBP eCLIP12.72□□□□□ -0.372e-7■■■■■ 30.5
SHANK2-203ENST00000409161 PLEKHA5Q9HAU0 1116 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 ATAD3AQ9NVI7 634 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 FBXO40Q9UH90 709 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 SSU72P8A0A1W2PR75 194 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 RALAP11233 206 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 PTK6Q13882 451 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 ARMC3Q5W041 872 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 UGT3A1Q6NUS8 523 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 TRAPPC11Q7Z392 1133 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 CROCCP3Q8IVE0 287 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 RASGRP4Q8TDF6 673 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 ARHGEF38Q9NXL2 777 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 RGL1Q9NZL6 768 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 TJP2Q9UDY2 1190 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 M0QYV0 167 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 CDC42EP1Q00587 391 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 ZNF544Q6NX49 715 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 LRRC49Q8IUZ0 686 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 SERPINB12Q96P63 405 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 ERAP1Q9NZ08 941 aa12.72□□□□□ -0.37
SHANK2-203ENST00000409161 KPNA4O00629 521 aaPredicted RBP12.71□□□□□ -0.37
SHANK2-203ENST00000409161 ASNA1O43681 348 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms