RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ADGRF2Q8IZF7 708 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 GUF1Q8N442 669 aaKnown RBP5.31□□□□□ -1.56
SCN3A-203ENST00000409101 PPFIBP2Q8ND30 876 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 TTC8Q8TAM2 541 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 CAMKK2Q96RR4 588 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 NUF2Q9BZD4 464 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 ZMYND12Q9H0C1 365 aa5.31□□□□□ -1.56
SCN3A-203ENST00000409101 UBA6A0AVT1 1052 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 CASTOR2A6NHX0 329 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 F5H5T6 163 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 SYF2O95926 243 aaKnown RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 ZBTB48P10074 688 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 HSPA8P11142 646 aaKnown RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 CAPN2P17655 700 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 LHX1P48742 406 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 PRMT2P55345 433 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 BCAR1P56945 870 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 EFHC1Q5JVL4 640 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 LLGL2Q6P1M3 1020 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 C18orf8Q96DM3 657 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 ZNF558Q96NG5 402 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 MRPL17Q9NRX2 175 aaKnown RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 TMEM63CQ9P1W3 806 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 WDR35Q9P2L0 1181 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 TSR3Q9UJK0 312 aaKnown RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 TBX20Q9UMR3 447 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 PPLO60437 1756 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 CCDC151A5D8V7 595 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 PRR23AA6NEV1 266 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 CCDC160A6NGH7 325 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 MT-ND3P03897 115 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 DDX5P17844 614 aaKnown RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 NDUFV1P49821 464 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 LAMB3Q13751 1172 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 PKP1Q13835 747 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 Q4G0T1 1027 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 APOBEC3HQ6NTF7 200 aaKnown RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 STOX1Q6ZVD7 989 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 MOB2Q70IA6 237 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 ZBTB18Q99592 522 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 CINPQ9BW66 212 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 CHST12Q9NRB3 414 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 SPTLC3Q9NUV7 552 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 EFCAB14O75071 495 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 POMCP01189 267 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 PRR29P0C7W0 189 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 INSRRP14616 1297 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 NPEPPSP55786 919 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 RBBP7Q16576 425 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 TSGA10IPQ3SY00 556 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 ANGPTL8Q6UXH0 198 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 SLC30A10Q6XR72 485 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 PDIK1LQ8N165 341 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 RBBP8NLQ8NC74 664 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 DAGLBQ8NCG7 672 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 ATP8B4Q8TF62 1192 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 RAPGEF5Q92565 580 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 ARHGEF2Q92974 986 aaKnown RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 ULK4Q96C45 1275 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 LRGUKQ96M69 825 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 XPO6Q96QU8 1125 aaKnown RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 KIFC3Q9BVG8 833 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 UXTQ9UBK9 157 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 IQANK1A0A1B0GTG1 560 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 A6NNZ2 444 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 EBAG9O00559 213 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 CYP26A1O43174 497 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 MYO1DO94832 1006 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 NCAM1P13591 858 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 CASP1P29466 404 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 CDH6P55285 790 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 CCL23P55773 120 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 ARL4CP56559 192 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 PPIGQ13427 754 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 POLD3Q15054 466 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 IMPG1Q17R60 797 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 TUBB8Q3ZCM7 444 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 ZNF410Q86VK4 478 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 C10orf67Q8IYJ2 551 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 REPS2Q8NFH8 660 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 LRRC8CQ8TDW0 803 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 PYROXD1Q8WU10 500 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 SPATA17Q96L03 361 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 PPP1R2P1Q96PQ5 205 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 DBR1Q9UK59 544 aaKnown RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 A0A087WZ62 844 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 AP1G2O75843 785 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 FARP2O94887 1054 aaPredicted RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 ZRANB2O95218 330 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 ARP10275 920 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 CYP11B2P19099 503 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 MUTP22033 750 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 FXR2P51116 673 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 DR1Q01658 176 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 LAMTOR4Q0VGL1 99 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 WASHC5Q12768 1159 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 AMHR2Q16671 573 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 PDCD2LQ9BRP1 358 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 FDXACB1Q9BRP7 624 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms