RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 C3orf58Q8NDZ4 430 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 TMEM161BQ8NDZ6 487 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 RIN2Q8WYP3 895 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 DRC1Q96MC2 740 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 ZMAT2Q96NC0 199 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 PPP1R10Q96QC0 940 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 ADPGKQ9BRR6 497 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 COLEC11Q9BWP8 271 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 RXFP1Q9HBX9 757 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 MAN1C1Q9NR34 630 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 BLOC1S4Q9NUP1 217 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 DZANK1Q9NVP4 752 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 TNFSF13BQ9Y275 285 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 ZMYM2Q9UBW7 1377 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 DNAH14Q0VDD8 3507 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 CARNS1A5YM72 827 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 I3L4J1 428 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 ADAM12O43184 909 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 TGM5O43548 720 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 TADA2AO75478 443 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 THP07101 528 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 ASGR2P07307 311 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 MAPTP10636 758 aaKnown RBP10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 PLS3P13797 630 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 PLCG1P19174 1290 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 MARCKSP29966 332 aaPredicted RBP10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 CLCNKBP51801 687 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 HNRNPH2P55795 449 aaKnown RBP10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 IRX1P78414 480 aaPredicted RBP10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 ITIH3Q06033 890 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 MCM6Q14566 821 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 PTPAQ15257 358 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 DCAF4L1Q3SXM0 396 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 DNAJC21Q5F1R6 531 aaKnown RBP10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 KIAA1841Q6NSI8 718 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 CES5AQ6NT32 575 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 BRAPQ7Z569 592 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 EDAQ92838 391 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 EPSTI1Q96J88 318 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 CDK5RAP3Q96JB5 506 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 CLIC6Q96NY7 704 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 REEP2Q9BRK0 252 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 MRPL4Q9BYD3 311 aaKnown RBP10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 TMEM134Q9H6X4 195 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 ANKFY1Q9P2R3 1169 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 MTMR6Q9Y217 621 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 RPS6KL1Q9Y6S9 549 aa10.56□□□□□ -0.72
NIF3L1-202ENST00000409020 SMIM28A0A1B0GU29 152 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 N4BP1O75113 896 aaKnown RBP10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 NR1I2O75469 434 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 UBA7P41226 1012 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 ZXDAP98168 799 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 USP41Q3LFD5 358 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 C1QTNF12Q5T7M4 302 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 FAM171A1Q5VUB5 890 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 ALKAL1Q6UXT8 129 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 RSPO2Q6UXX9 243 aaPredicted RBP10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 GPR149Q86SP6 731 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 PPFIBP1Q86W92 1011 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 GPBP1Q86WP2 473 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 C18orf25Q96B23 403 aaPredicted RBP10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 AK8Q96MA6 479 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 NTPCRQ9BSD7 190 aaKnown RBP10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 NT5C3AQ9H0P0 336 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 IKZF4Q9H2S9 585 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 SFXN1Q9H9B4 322 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 FBXO2Q9UK22 296 aaPredicted RBP10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 ZNF318Q5VUA4 2279 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 C2orf16Q68DN1 1984 aa10.55□□□□□ -0.72
NIF3L1-202ENST00000409020 PIEZO1Q92508 2521 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 GLUD1P00367 558 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 GRM5P41594 1212 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 PTPN21Q16825 1174 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 MAP9Q49MG5 647 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 XKR4Q5GH76 650 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 ATAT1Q5SQI0 421 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 ZBTB41Q5SVQ8 909 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 MPZL3Q6UWV2 235 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 TRIM67Q6ZTA4 783 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 CEP57Q86XR8 500 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 ST13P5Q8NFI4 369 aaPredicted RBP10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 LNX1Q8TBB1 728 aaPredicted RBP10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 SPIRE2Q8WWL2 714 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 RAD54LQ92698 747 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 ZNF707Q96C28 371 aaPredicted RBP10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 SNX27Q96L92 541 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 RIPOR3Q96MK2 946 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 NECTIN4Q96NY8 510 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 CLSTN3Q9BQT9 956 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 TCHPQ9BT92 498 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 FAM53CQ9NYF3 392 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 CWC15Q9P013 229 aaKnown RBP10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 STK39Q9UEW8 545 aa10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 SF3B1O75533 1304 aaKnown RBP eCLIP10.54□□□□□ -0.72
NIF3L1-202ENST00000409020 TMEM221A6NGB7 291 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 K7ELQ4 463 aaPredicted RBP10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 M0R296 226 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 BRD1O95696 1058 aa10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 PDGFBP01127 241 aaPredicted RBP10.53□□□□□ -0.72
NIF3L1-202ENST00000409020 ADH1AP07327 375 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms