RNA–Protein interactions for RNA: ENST00000406569.7

PMS2-204, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS2, Length 1,719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-204ENST00000406569 NBPF9Q3BBW0 867 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 ZACNQ401N2 412 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 PPP1R2P3Q6NXS1 205 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 TRPM8Q7Z2W7 1104 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 FAM228AQ86W67 206 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 CCDC25Q86WR0 208 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 CPXCR1Q8N123 301 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 LARGE2Q8N3Y3 721 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 BBOF1Q8ND07 529 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 ARHGEF2Q92974 986 aaKnown RBP14.54□□□□□ -0.08
PMS2-204ENST00000406569 FAM212AQ96EL1 285 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 NCAPGQ9BPX3 1015 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 ELAC2Q9BQ52 826 aaKnown RBP14.54□□□□□ -0.08
PMS2-204ENST00000406569 TRIM7Q9C029 511 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 XPNPEP1Q9NQW7 623 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.54□□□□□ -0.08
PMS2-204ENST00000406569 EURLQ9NYK6 297 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 TPX2Q9ULW0 747 aaKnown RBP14.54□□□□□ -0.08
PMS2-204ENST00000406569 CNTN6Q9UQ52 1028 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 ACTL7BQ9Y614 415 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 NFASCO94856 1347 aa14.54□□□□□ -0.08
PMS2-204ENST00000406569 COL11A1P12107 1806 aaPredicted RBP14.54□□□□□ -0.08
PMS2-204ENST00000406569 CFAP73A6NFT4 308 aa14.53□□□□□ -0.08
PMS2-204ENST00000406569 DGAT1O75907 488 aa14.53□□□□□ -0.08
PMS2-204ENST00000406569 C4BPAP04003 597 aaKnown RBP14.53□□□□□ -0.08
PMS2-204ENST00000406569 KRT5P13647 590 aa14.53□□□□□ -0.08
PMS2-204ENST00000406569 ATF2P15336 505 aa14.53□□□□□ -0.08
PMS2-204ENST00000406569 ACO1P21399 889 aaKnown RBP14.53□□□□□ -0.08
PMS2-204ENST00000406569 RRM1P23921 792 aa14.53□□□□□ -0.08
PMS2-204ENST00000406569 LONRF1Q17RB8 773 aa14.53□□□□□ -0.08
PMS2-204ENST00000406569 GALNTL6Q49A17 601 aa14.53□□□□□ -0.08
PMS2-204ENST00000406569 KATNAL2Q8IYT4 538 aa14.53□□□□□ -0.08
PMS2-204ENST00000406569 CKAP2Q8WWK9 683 aa14.53□□□□□ -0.08
PMS2-204ENST00000406569 ATP6V0A1Q93050 837 aa14.53□□□□□ -0.08
PMS2-204ENST00000406569 NINJ2Q9NZG7 142 aa14.53□□□□□ -0.08
PMS2-204ENST00000406569 DOCK1Q14185 1865 aa14.53□□□□□ -0.08
PMS2-204ENST00000406569 TMEM120BA0PK00 339 aa14.52□□□□□ -0.08
PMS2-204ENST00000406569 PIGRP01833 764 aa14.52□□□□□ -0.08
PMS2-204ENST00000406569 VIMP08670 466 aaKnown RBP14.52□□□□□ -0.08
PMS2-204ENST00000406569 ABHD2P08910 425 aa14.52□□□□□ -0.08
PMS2-204ENST00000406569 MYCLP12524 364 aaPredicted RBP14.52□□□□□ -0.08
PMS2-204ENST00000406569 KCNA2P16389 499 aa14.52□□□□□ -0.08
PMS2-204ENST00000406569 CCND2P30279 289 aa14.52□□□□□ -0.08
PMS2-204ENST00000406569 ELF3P78545 371 aaPredicted RBP14.52□□□□□ -0.08
PMS2-204ENST00000406569 RIPK1Q13546 671 aa14.52□□□□□ -0.08
PMS2-204ENST00000406569 SNX1Q13596 522 aa14.52□□□□□ -0.08
PMS2-204ENST00000406569 TBC1D10BQ4KMP7 808 aaPredicted RBP14.52□□□□□ -0.08
PMS2-204ENST00000406569 PLEKHA7Q6IQ23 1121 aa14.52□□□□□ -0.08
PMS2-204ENST00000406569 CEP128Q6ZU80 1094 aa14.52□□□□□ -0.08
PMS2-204ENST00000406569 PHF13Q86YI8 300 aaPredicted RBP14.52□□□□□ -0.08
PMS2-204ENST00000406569 ATG4AQ8WYN0 398 aa14.52□□□□□ -0.08
PMS2-204ENST00000406569 CEP170P1Q96L14 293 aa14.52□□□□□ -0.08
PMS2-204ENST00000406569 PLCD4Q9BRC7 762 aa14.52□□□□□ -0.08
PMS2-204ENST00000406569 KCNG1Q9UIX4 513 aa14.52□□□□□ -0.08
PMS2-204ENST00000406569 ANAPC5Q9UJX4 755 aa14.52□□□□□ -0.08
PMS2-204ENST00000406569 R3HDM2Q9Y2K5 976 aaKnown RBP14.52□□□□□ -0.08
PMS2-204ENST00000406569 ZBTB12Q9Y330 459 aaPredicted RBP14.52□□□□□ -0.08
PMS2-204ENST00000406569 USP15Q9Y4E8 981 aaPredicted RBP14.52□□□□□ -0.08
PMS2-204ENST00000406569 ZBED4O75132 1171 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 ACSL3O95573 720 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 HLA-DRAP01903 254 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 POTEJP0CG39 1038 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 NOMO3P69849 1222 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 MKRN3Q13064 507 aaKnown RBP14.52□□□□□ -0.09
PMS2-204ENST00000406569 CCDC38Q502W7 563 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 LIN9Q5TKA1 542 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 ARHGEF16Q5VV41 709 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 SMYD5Q6GMV2 418 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 NLRX1Q86UT6 975 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 RHOT1Q8IXI2 618 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 RIBC1Q8N443 379 aaPredicted RBP14.52□□□□□ -0.09
PMS2-204ENST00000406569 EXD1Q8NHP7 514 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 TEPSINQ96N21 525 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 PI4K2AQ9BTU6 479 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 CD248Q9HCU0 757 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 GABBR1Q9UBS5 961 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 LOC285556D6RIA3 1793 aa14.52□□□□□ -0.09
PMS2-204ENST00000406569 O00370 1275 aa14.51□□□□□ -0.09
PMS2-204ENST00000406569 HNRNPDLO14979 420 aaKnown RBP14.51□□□□□ -0.09
PMS2-204ENST00000406569 GJB6O95452 261 aa14.51□□□□□ -0.09
PMS2-204ENST00000406569 KLRC2P26717 231 aa14.51□□□□□ -0.09
PMS2-204ENST00000406569 NSFP46459 744 aaKnown RBP14.51□□□□□ -0.09
PMS2-204ENST00000406569 IFNAR2P48551 515 aa14.51□□□□□ -0.09
PMS2-204ENST00000406569 STAT4Q14765 748 aa14.51□□□□□ -0.09
PMS2-204ENST00000406569 KYNUQ16719 465 aa14.51□□□□□ -0.09
PMS2-204ENST00000406569 CCDC142Q17RM4 750 aa14.51□□□□□ -0.09
PMS2-204ENST00000406569 WDR44Q5JSH3 913 aa14.51□□□□□ -0.09
PMS2-204ENST00000406569 ABRAQ8N0Z2 381 aa14.51□□□□□ -0.09
PMS2-204ENST00000406569 CCDC89Q8N998 374 aa14.51□□□□□ -0.09
PMS2-204ENST00000406569 FAM213AQ9BRX8 229 aa14.51□□□□□ -0.09
PMS2-204ENST00000406569 HOMER2Q9NSB8 354 aa14.51□□□□□ -0.09
PMS2-204ENST00000406569 GEMIN8Q9NWZ8 242 aaKnown RBP14.51□□□□□ -0.09
PMS2-204ENST00000406569 PRKAG3Q9UGI9 489 aa14.51□□□□□ -0.09
PMS2-204ENST00000406569 PHIPQ8WWQ0 1821 aa14.51□□□□□ -0.09
PMS2-204ENST00000406569 VWA5AO00534 786 aa14.5□□□□□ -0.09
PMS2-204ENST00000406569 WNT10BO00744 389 aa14.5□□□□□ -0.09
PMS2-204ENST00000406569 CDH16O75309 829 aa14.5□□□□□ -0.09
PMS2-204ENST00000406569 VNN1O95497 513 aa14.5□□□□□ -0.09
PMS2-204ENST00000406569 CALCAP01258 141 aa14.5□□□□□ -0.09
PMS2-204ENST00000406569 PSAPP07602 524 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms