RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 LRRD1A4D1F6 860 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 GOLGA8IPA6NC78 632 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 GOLGA8JA6NMD2 632 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 SMIM24O75264 130 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 AP1G2O75843 785 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 CYP11B1P15538 503 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 MXI1P50539 228 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 CAV1Q03135 178 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 SLC9A9Q8IVB4 645 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 ASAP3Q8TDY4 903 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 MAML1Q92585 1016 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 INPP5DQ92835 1189 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 TMEM117Q9H0C3 514 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 STK32BQ9NY57 414 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 EURLQ9NYK6 297 aa14.87□□□□□ -0.03
APOB-202ENST00000399256 CACNB3P54284 484 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 CRY2Q49AN0 593 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 TAF1BQ53T94 588 aaPredicted RBP14.86□□□□□ -0.03
APOB-202ENST00000399256 C2CD6Q53TS8 623 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 LLGL2Q6P1M3 1020 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 SYDE1Q6ZW31 735 aaPredicted RBP14.86□□□□□ -0.03
APOB-202ENST00000399256 ZNF365Q70YC5 407 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 DAW1Q8N136 415 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 ATL2Q8NHH9 583 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 DHX38Q92620 1227 aaKnown RBP14.86□□□□□ -0.03
APOB-202ENST00000399256 TSC22D3Q99576 134 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 SYT15Q9BQS2 421 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 ACTL7BQ9Y614 415 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 GAS7O60861 476 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 PSMD10O75832 226 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 DCTN3O75935 186 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 NEFHP12036 1026 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 TCP10Q12799 353 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 TMEM154Q6P9G4 183 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 TRABD2AQ86V40 505 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 CERS5Q8N5B7 392 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 DNAJC9Q8WXX5 260 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 RBM15Q96T37 977 aaKnown RBP eCLIP14.86□□□□□ -0.033e-19■□□□□ 8.5
APOB-202ENST00000399256 TRABDQ9H4I3 376 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 ARHGEF35A5YM69 484 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 GNAT1P11488 350 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 BMP3P12645 472 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 KRT15P19012 456 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 ALDH3A1P30838 453 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 RPA3P35244 121 aaPredicted RBP14.86□□□□□ -0.03
APOB-202ENST00000399256 MAGEA4P43358 317 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 PRELPP51888 382 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 SPARCL1Q14515 664 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 PKN2Q16513 984 aaKnown RBP14.86□□□□□ -0.03
APOB-202ENST00000399256 CDC42EP5Q6NZY7 148 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 LRRC8CQ8TDW0 803 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 SEMA4DQ92854 862 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 NACC1Q96RE7 527 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 SAYSD1Q9NPB0 183 aa14.86□□□□□ -0.03
APOB-202ENST00000399256 E7ENQ6 273 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 F5H6K3 240 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 RALAP11233 206 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 GCAP28676 217 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 MAN1A1P33908 653 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 GJC1P36383 396 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 MRPS35P82673 323 aaKnown RBP14.85□□□□□ -0.03
APOB-202ENST00000399256 MUM1Q2TAK8 710 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 RFWD3Q6PCD5 774 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.85□□□□□ -0.036e-18■■□□□ 13.2
APOB-202ENST00000399256 ENDOVQ8N8Q3 282 aaKnown RBP14.85□□□□□ -0.03
APOB-202ENST00000399256 C10orf82Q8WW14 230 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 VTI1AQ96AJ9 217 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 PIDD1Q9HB75 910 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 KIAA1586Q9HCI6 787 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 DDX39AO00148 427 aaKnown RBP14.85□□□□□ -0.03
APOB-202ENST00000399256 EDF1O60869 148 aaKnown RBP14.85□□□□□ -0.03
APOB-202ENST00000399256 CFBP00751 764 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 FESP07332 822 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 POTEJP0CG39 1038 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 CDR2Q01850 454 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 TSNAXIP1Q2TAA8 658 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 SLC30A9Q6PML9 568 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 GSTA5Q7RTV2 222 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 HSPBP1Q9NZL4 362 aa14.85□□□□□ -0.03
APOB-202ENST00000399256 MAGEB2O15479 319 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 AHCYL1O43865 530 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 SNUPNO95149 360 aaKnown RBP14.84□□□□□ -0.03
APOB-202ENST00000399256 MMP10P09238 476 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 MFAP3P55082 362 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 SLC1A5Q15758 541 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 P3H1Q32P28 736 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 ACAD10Q6JQN1 1059 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 SIAH1Q8IUQ4 282 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 DENND1AQ8TEH3 1009 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 TEKT4Q8WW24 435 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 SHC3Q92529 594 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 CCDC127Q96BQ5 260 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 LXNQ9BS40 222 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 STRA6Q9BX79 667 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 UNC45AQ9H3U1 944 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 NPHS2Q9NP85 383 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 ZFP69BQ9UJL9 534 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 MYH11P35749 1972 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 GDF11O95390 407 aa14.84□□□□□ -0.03
APOB-202ENST00000399256 CYP3A4P08684 503 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms