RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 PRR12Q9ULL5 1215 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 AXIN2Q9Y2T1 843 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 UTYO14607 1347 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 FAM135BQ49AJ0 1406 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 DEFB115Q30KQ5 88 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 DHTKD1Q96HY7 919 aaPredicted RBP11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 C11orf70Q9BRQ4 267 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 KRCC1Q9NPI7 259 aaPredicted RBP11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 PCMTD2Q9NV79 361 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 VTI1BQ9UEU0 232 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 SNX5Q9Y5X3 404 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 CLIC4Q9Y696 253 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 CCDC189A1A4V9 331 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 TBC1D3BA6NDS4 549 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 C3orf70A6NLC5 250 aaPredicted RBP11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 ACSL3O95573 720 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 DGKZQ13574 1117 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 MTFR1Q15390 333 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 AMHR2Q16671 573 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 WHAMMP3Q1A5X7 153 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 CTXN3Q4LDR2 81 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 TESK2Q96S53 571 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 USP18Q9UMW8 372 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 TDRKHQ9Y2W6 561 aaKnown RBP11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 CAPN7Q9Y6W3 813 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 CAPN1P07384 714 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 C6orf10Q5SRN2 563 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 MTSS1LQ765P7 747 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 ADGRF4Q8IZF3 695 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 SENP7Q9BQF6 1050 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 PDZK1P1A8MUH7 402 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 ACSL4O60488 711 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 CYP2D6P10635 497 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 TCP1P17987 556 aaKnown RBP11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 ARL4CP56559 192 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 CUL4AQ13619 759 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 ZC3H18Q86VM9 953 aaKnown RBP11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 ACSF2Q96CM8 615 aaPredicted RBP11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 MRFAP1L1Q96HT8 127 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 REXO5Q96IC2 774 aaKnown RBP11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 MCF2P10911 925 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 GSPT1P15170 499 aaKnown RBP11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 FSCBQ5H9T9 825 aa11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.98□□□□□ -0.497e-7■■□□□ 13.8
SLC38A1-201ENST00000398637 LIMA1Q9UHB6 759 aaKnown RBP11.98□□□□□ -0.49
SLC38A1-201ENST00000398637 RASSF10A6NK89 507 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 F5H5T6 163 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 CCT5P48643 541 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 VAMP7P51809 220 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 LAMC2Q13753 1193 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 HLFQ16534 295 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 BTN2A1Q7KYR7 527 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 HERC6Q8IVU3 1022 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 XPO4Q9C0E2 1151 aaKnown RBP11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 EPN3Q9H201 632 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 ANAPC2Q9UJX6 822 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 PRDX5P30044 214 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 ME3Q16798 604 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 DCAF6Q58WW2 860 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 SNAP47Q5SQN1 464 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 GPD1LQ8N335 351 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 LEMD2Q8NC56 503 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 CLMNQ96JQ2 1002 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 REXO4Q9GZR2 422 aaKnown RBP11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 FOXP1Q9H334 677 aaPredicted RBP11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 RWDD2BP57060 319 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 CCDC142Q17RM4 750 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 TBC1D25Q3MII6 688 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 LMBRD2Q68DH5 695 aaPredicted RBP11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 CCDC60Q8IWA6 550 aaPredicted RBP11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 TDRD7Q8NHU6 1098 aaKnown RBP11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 SCFD2Q8WU76 684 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 KCNS3Q9BQ31 491 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 KLHL25Q9H0H3 589 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 CPVLQ9H3G5 476 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 PKD2L2Q9NZM6 624 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 CYTH3O43739 400 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 FKBP9O95302 570 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 CHI3L1P36222 383 aaPredicted RBP11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 RASIP1Q5U651 963 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 FKBP9P1Q75LS8 142 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 MIB1Q86YT6 1006 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 TTC13Q8NBP0 860 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 BTBD6Q96KE9 485 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 KIAA1468Q9P260 1216 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 FTCDO95954 541 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 TGM3Q08188 693 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 RERGLQ9H628 205 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 GOLGA8RI6L899 631 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 TLL1O43897 1013 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 SYCP2LQ5T4T6 812 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 PI16Q6UXB8 463 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 ATP6V0D2Q8N8Y2 350 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 CLIP3Q96DZ5 547 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 APOBEC2Q9Y235 224 aaKnown RBP11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 ACTN3Q08043 901 aaPredicted RBP11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 NUP93Q8N1F7 819 aa11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 RNF25Q96BH1 459 aaPredicted RBP11.97□□□□□ -0.49
SLC38A1-201ENST00000398637 BTKQ06187 659 aa11.96□□□□□ -0.49
SLC38A1-201ENST00000398637 CNTN1Q12860 1018 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms