RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 SPATA4Q8NEY3 305 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 CXorf38Q8TB03 319 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 MXRA8Q9BRK3 442 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 SLC13A4Q9UKG4 626 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 PPP1R9AQ9ULJ8 1098 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 MRFAP1Q9Y605 127 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 ZC3H4Q9UPT8 1303 aaKnown RBP12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 PRRG1O14668 218 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 TRAPPC3O43617 180 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 NFKBIAP25963 317 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 KLK7P49862 253 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 HSD17B4P51659 736 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 EIF3EP60228 445 aaKnown RBP12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 CAPRIN1Q14444 709 aaKnown RBP12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 KCNB1Q14721 858 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 SMTNL2Q2TAL5 461 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 NBPF12Q5TAG4 269 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 AGBL3Q8NEM8 1001 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 APPL2Q8NEU8 664 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 N4BP2L2Q92802 583 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 PGBD4Q96DM1 585 aa12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 FARP1Q9Y4F1 1045 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA8-201ENST00000398604 E2F8A0AVK6 867 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 ATN1P54259 1190 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 ROR1Q01973 937 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 RAD51Q06609 339 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 IER5Q5VY09 327 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 ATG16L1Q676U5 607 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 PGBD3Q8N328 593 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 SYT2Q8N9I0 419 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 NCLNQ969V3 563 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 L3MBTL3Q96JM7 780 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 PARK7Q99497 189 aaKnown RBP12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 TRIM55Q9BYV6 548 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 CYP26B1Q9NR63 512 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 PARVAQ9NVD7 372 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 SFMBT1Q9UHJ3 866 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 RSPH10B2B2RC85 870 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 DDNO94850 711 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 ASMTLO95671 621 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 HLA-DRAP01903 254 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 RSPH10BP0C881 870 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 TAC1P20366 129 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 FGFR4P22455 802 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 CLCN3P51790 818 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 PMS2P54278 862 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 SNCBQ16143 134 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 MAP1SQ66K74 1059 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 KCNV1Q6PIU1 500 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 GLB1LQ6UWU2 654 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 CATSPER3Q86XQ3 398 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 SCG3Q8WXD2 468 aaKnown RBP12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 HVCN1Q96D96 273 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 SLC4A9Q96Q91 983 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 Q9H521 79 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 CNOT10Q9H9A5 744 aaKnown RBP12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 ZFYVE28Q9HCC9 887 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 ANO9A1A5B4 782 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 KCNN4O15554 427 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 GCKP35557 465 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 TPI1P60174 286 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 COPS2P61201 443 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 CXCL9Q07325 125 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 ORC2Q13416 577 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 C9orf131Q5VYM1 1079 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 RFX8Q6ZV50 586 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 ZNF507Q8TCN5 953 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 GLT1D1Q96MS3 346 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 MCEEQ96PE7 176 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 NUDT12Q9BQG2 462 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 LRRC1Q9BTT6 524 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 CYP4F11Q9HBI6 524 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 ANLNQ9NQW6 1124 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 RAB6BQ9NRW1 208 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 APEX2Q9UBZ4 518 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 MID2Q9UJV3 735 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 CAPN11Q9UMQ6 739 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 DDTLA6NHG4 134 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 KBTBD13C9JR72 458 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 B3GAT3O94766 335 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 EFHD1Q9BUP0 239 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 TRAIPQ9BWF2 469 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 FBXL5Q9UKA1 691 aa12.17□□□□□ -0.46
PCDHGA8-201ENST00000398604 HMGB1P1B2RPK0 211 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 SLC37A4O43826 429 aa12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 HOXA7P31268 230 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 CASP7P55210 303 aa12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 DCAF6Q58WW2 860 aa12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 ATF7IP2Q5U623 682 aa12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 KRT80Q6KB66 452 aa12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 TTC23LQ6PF05 361 aa12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 LRP10Q7Z4F1 713 aa12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 SPATS2Q86XZ4 545 aaKnown RBP12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 TC2NQ8N9U0 490 aa12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 SLC35G2Q8TBE7 412 aa12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 ZFATQ9P243 1243 aa12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 GGT7Q9UJ14 662 aa12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 LMO7Q8WWI1 1683 aa12.16□□□□□ -0.46
PCDHGA8-201ENST00000398604 CNTNAP5Q8WYK1 1306 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms