RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 EPHB4P54760 987 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 TCP10Q12799 353 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 TAF1CQ15572 869 aaPredicted RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 ACAD11Q709F0 780 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 CATSPER4Q7RTX7 472 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 PASD1Q8IV76 773 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 RYBPQ8N488 228 aaPredicted RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 ZNF579Q8NAF0 562 aaKnown RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 TINF2Q9BSI4 451 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 NAT9Q9BTE0 207 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 C1orf115Q9H7X2 142 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 BTBD7Q9P203 1132 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 ZNRF3Q9ULT6 936 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 MRPS17Q9Y2R5 130 aaKnown RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 WDR81Q562E7 1941 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 ABCA3Q99758 1704 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 SCN7AQ01118 1682 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 A0A1W2PQ27 194 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 A0A1W2PQ64 194 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 A0A1W2PQD8 194 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 SPDYE5A6NIY4 337 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 GPR182O15218 404 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 COBLO75128 1261 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 GLP2RO95838 553 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 ALAS1P13196 640 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 HOXC8P31273 242 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 PRIM1P49642 420 aaKnown RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 CHRNDQ07001 517 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 RRM2BQ7LG56 351 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 CDKL3Q8IVW4 592 aaPredicted RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 APLFQ8IW19 511 aaPredicted RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 FBXO18Q8NFZ0 1043 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 ARHGEF2Q92974 986 aaKnown RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 GPCPD1Q9NPB8 672 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 PARVAQ9NVD7 372 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 INTS7Q9NVH2 962 aaKnown RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 ABI3Q9P2A4 366 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 ZBTB1Q9Y2K1 713 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 GRID2IPA4D2P6 1211 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 PRPF3O43395 683 aaKnown RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 ZNF202O95125 648 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 ABL1P00519 1130 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 AMHP03971 560 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 GJC1P36383 396 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 CTCFP49711 727 aaPredicted RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 RPP38P78345 283 aaKnown RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 PIGHQ14442 188 aaPredicted RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 IMPG1Q17R60 797 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 FKBP1CQ5VVH2 108 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 ERAP2Q6P179 960 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 FAM47EQ6ZV65 393 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 USP50Q70EL3 339 aaPredicted RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 TRAPPC11Q7Z392 1133 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 SETD3Q86TU7 594 aaPredicted RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 C11orf74Q86VG3 221 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 CCDC60Q8IWA6 550 aaPredicted RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 ATPAF2Q8N5M1 289 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 MSL3Q8N5Y2 521 aaKnown RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 LEMD2Q8NC56 503 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 RNF169Q8NCN4 708 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 PPHLN1Q8NEY8 458 aaKnown RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 SSH3Q8TE77 659 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 PABPC5Q96DU9 382 aaKnown RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 GLT1D1Q96MS3 346 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 WRNIP1Q96S55 665 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 SELENOSQ9BQE4 189 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 RNF181Q9P0P0 153 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 COPG2Q9UBF2 871 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 APPL1Q9UKG1 709 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 SPATA31A3Q5VYP0 1347 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 PDE2AO00408 941 aaPredicted RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 SNAPC5O75971 98 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 SASH1O94885 1247 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 IFNA14P01570 189 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 KBTBD12Q3ZCT8 623 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 SNRNP48Q6IEG0 339 aaKnown RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 PLEKHM3Q6ZWE6 761 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 ZNF410Q86VK4 478 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 UNC45BQ8IWX7 931 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 PIK3R5Q8WYR1 880 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 SYMPKQ92797 1274 aaKnown RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 CCDC127Q96BQ5 260 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 DNAJC7Q99615 494 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 PLA2G4CQ9UP65 541 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 PCDHB6Q9Y5E3 794 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 RAD54BQ9Y620 910 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 NVLO15381 856 aaKnown RBP2.87□□□□□ -1.95
CHD9-202ENST00000398510 GH1P01241 217 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 SDC4P31431 198 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 SKOR1P84550 965 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 FAM189A2Q15884 450 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 UNQ6126/PRO20091Q6UXV3 157 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 TRIM67Q6ZTA4 783 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 STK40Q8N2I9 435 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 NT5C1AQ9BXI3 368 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 CACNA2D2Q9NY47 1150 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 NRAPQ86VF7 1730 aa2.87□□□□□ -1.95
CHD9-202ENST00000398510 C5orf58C9J3I9 102 aa2.86□□□□□ -1.95
CHD9-202ENST00000398510 IFRD1O00458 451 aaPredicted RBP2.86□□□□□ -1.95
CHD9-202ENST00000398510 ZMYND10O75800 440 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms