RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 BEST2Q8NFU1 509 aa16.41■□□□□ 0.22
SUMO3-203ENST00000397898 RSPH1Q8WYR4 309 aa16.41■□□□□ 0.22
SUMO3-203ENST00000397898 TRIM44Q96DX7 344 aaPredicted RBP16.41■□□□□ 0.22
SUMO3-203ENST00000397898 SLC9A7Q96T83 725 aa16.41■□□□□ 0.22
SUMO3-203ENST00000397898 UBE2OQ9C0C9 1292 aaKnown RBP16.41■□□□□ 0.22
SUMO3-203ENST00000397898 RTN4Q9NQC3 1192 aaKnown RBP16.41■□□□□ 0.22
SUMO3-203ENST00000397898 TBC1D13Q9NVG8 400 aa16.41■□□□□ 0.22
SUMO3-203ENST00000397898 DPP3Q9NY33 737 aa16.41■□□□□ 0.22
SUMO3-203ENST00000397898 IFNKQ9P0W0 207 aa16.41■□□□□ 0.22
SUMO3-203ENST00000397898 TRIP11Q15643 1979 aa16.41■□□□□ 0.22
SUMO3-203ENST00000397898 N4BP1O75113 896 aaKnown RBP16.41■□□□□ 0.22
SUMO3-203ENST00000397898 GJB5O95377 273 aa16.41■□□□□ 0.22
SUMO3-203ENST00000397898 GUCY2FP51841 1108 aa16.41■□□□□ 0.22
SUMO3-203ENST00000397898 MYL7Q01449 175 aa16.41■□□□□ 0.22
SUMO3-203ENST00000397898 SOX4Q06945 474 aaPredicted RBP16.41■□□□□ 0.22
SUMO3-203ENST00000397898 SHHQ15465 462 aa16.41■□□□□ 0.22
SUMO3-203ENST00000397898 TMEM130Q8N3G9 435 aa16.41■□□□□ 0.22
SUMO3-203ENST00000397898 C1orf127Q8N9H9 656 aa16.41■□□□□ 0.22
SUMO3-203ENST00000397898 PHOSPHO2Q8TCD6 241 aa16.41■□□□□ 0.22
SUMO3-203ENST00000397898 ZNF689Q96CS4 500 aaPredicted RBP16.41■□□□□ 0.22
SUMO3-203ENST00000397898 RNPC3Q96LT9 517 aaKnown RBP16.41■□□□□ 0.22
SUMO3-203ENST00000397898 CEP290O15078 2479 aa16.4■□□□□ 0.22
SUMO3-203ENST00000397898 PMM2O15305 246 aa16.4■□□□□ 0.22
SUMO3-203ENST00000397898 PHACTR2O75167 634 aa16.4■□□□□ 0.22
SUMO3-203ENST00000397898 ATP2A2P16615 1042 aaKnown RBP16.4■□□□□ 0.22
SUMO3-203ENST00000397898 CYP3A5P20815 502 aa16.4■□□□□ 0.22
SUMO3-203ENST00000397898 UBXN1Q04323 297 aa16.4■□□□□ 0.22
SUMO3-203ENST00000397898 RNASELQ05823 741 aaKnown RBP16.4■□□□□ 0.22
SUMO3-203ENST00000397898 PAN2Q504Q3 1202 aaKnown RBP16.4■□□□□ 0.22
SUMO3-203ENST00000397898 MRPL9Q9BYD2 267 aaKnown RBP16.4■□□□□ 0.22
SUMO3-203ENST00000397898 RC3H2Q9HBD1 1191 aaKnown RBP16.4■□□□□ 0.22
SUMO3-203ENST00000397898 GOLGA2P5Q9HBQ8 144 aa16.4■□□□□ 0.22
SUMO3-203ENST00000397898 PDCD11Q14690 1871 aaKnown RBP16.39■□□□□ 0.21
SUMO3-203ENST00000397898 P4HA2O15460 535 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 TEX33O43247 280 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 DDHD2O94830 711 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 ITGB3P05106 788 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 CETN1Q12798 172 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 NR1I3Q14994 352 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 FKBP15Q5T1M5 1219 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 SCARA3Q6AZY7 606 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 ZNF280BQ86YH2 543 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 HERC6Q8IVU3 1022 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 LRRC43Q8N309 656 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 CXorf38Q8TB03 319 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 TAS1R2Q8TE23 839 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 YME1L1Q96TA2 773 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 ZBED2Q9BTP6 218 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 TRIM5Q9C035 493 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 XPO4Q9C0E2 1151 aaKnown RBP16.39■□□□□ 0.21
SUMO3-203ENST00000397898 ITGA11Q9UKX5 1188 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.39■□□□□ 0.21
SUMO3-203ENST00000397898 PTPRSQ13332 1948 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 RANBP2P49792 3224 aaKnown RBP16.39■□□□□ 0.21
SUMO3-203ENST00000397898 COL4A6Q14031 1691 aa16.39■□□□□ 0.21
SUMO3-203ENST00000397898 GTPBP10A4D1E9 387 aaKnown RBP16.38■□□□□ 0.21
SUMO3-203ENST00000397898 VNN1O95497 513 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 CST3P01034 146 aaPredicted RBP16.38■□□□□ 0.21
SUMO3-203ENST00000397898 KRT19P08727 400 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 MLLT1Q03111 559 aaPredicted RBP16.38■□□□□ 0.21
SUMO3-203ENST00000397898 DSC1Q08554 894 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 TUSC3Q13454 348 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 NCOA4Q13772 614 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 FBXL13Q8NEE6 735 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 CRACR2AQ9BSW2 395 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 SIX4Q9UIU6 781 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 COQ4Q9Y3A0 265 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 CASTOR2A6NHX0 329 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 CBFA2T2O43439 604 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 B4GALT3O60512 393 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 HLA-DRAP01903 254 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 LRPAP1P30533 357 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 POLR2BP30876 1174 aaKnown RBP16.38■□□□□ 0.21
SUMO3-203ENST00000397898 PIK3CAP42336 1068 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 ZNF75DP51815 510 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 HTRA4P83105 476 aaPredicted RBP16.38■□□□□ 0.21
SUMO3-203ENST00000397898 TRPC3Q13507 836 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 EPC2Q52LR7 807 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 GBP6Q6ZN66 633 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 COLGALT2Q8IYK4 626 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 SEMA4DQ92854 862 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 FAM193BQ96PV7 902 aaPredicted RBP16.38■□□□□ 0.21
SUMO3-203ENST00000397898 RAB20Q9NX57 234 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 GCNT4Q9P109 453 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 HCSTQ9UBK5 93 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 CACNG4Q9UBN1 327 aa16.38■□□□□ 0.21
SUMO3-203ENST00000397898 FNDC1Q4ZHG4 1894 aaPredicted RBP16.37■□□□□ 0.21
SUMO3-203ENST00000397898 TDRD15B5MCY1 1934 aaKnown RBP16.37■□□□□ 0.21
SUMO3-203ENST00000397898 ANO9A1A5B4 782 aa16.37■□□□□ 0.21
SUMO3-203ENST00000397898 LRRN2O75325 713 aa16.37■□□□□ 0.21
SUMO3-203ENST00000397898 TPM3P06753 285 aa16.37■□□□□ 0.21
SUMO3-203ENST00000397898 CLCNKBP51801 687 aa16.37■□□□□ 0.21
SUMO3-203ENST00000397898 RBP5P82980 135 aa16.37■□□□□ 0.21
SUMO3-203ENST00000397898 BTG3Q14201 252 aaPredicted RBP16.37■□□□□ 0.21
SUMO3-203ENST00000397898 PTPN21Q16825 1174 aa16.37■□□□□ 0.21
SUMO3-203ENST00000397898 EXOC3L4Q17RC7 722 aa16.37■□□□□ 0.21
SUMO3-203ENST00000397898 C9orf57Q5W0N0 161 aa16.37■□□□□ 0.21
SUMO3-203ENST00000397898 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.37■□□□□ 0.21
SUMO3-203ENST00000397898 CMTR2Q8IYT2 770 aaKnown RBP16.37■□□□□ 0.21
SUMO3-203ENST00000397898 RAD9AQ99638 391 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms