RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 DBF4BQ8NFT6 615 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 OR5B17Q8NGF7 314 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 LMO3Q8TAP4 145 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 SNX27Q96L92 541 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 TTYH3Q9C0H2 523 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 RNF39Q9H2S5 420 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 ASB7Q9H672 318 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 CERS4Q9HA82 394 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 PLEKHA5Q9HAU0 1116 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 GCNT4Q9P109 453 aa18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.31■□□□□ 0.52
TSPAN4-205ENST00000397406 MICAL3Q7RTP6 2002 aa18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 TULP1O00294 542 aaPredicted RBP18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 PARNO95453 639 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 GYPCP04921 128 aa18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 AP3M2P53677 418 aa18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 FIGNQ5HY92 759 aa18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 ALKAL1Q6UXT8 129 aa18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 MRPL10Q7Z7H8 261 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 CD302Q8IX05 232 aa18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 LINC01599Q8WXQ3 324 aa18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 PCMTD1Q96MG8 357 aaPredicted RBP18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 ADAM2Q99965 735 aa18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 LSM14BQ9BX40 385 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 CXCL16Q9H2A7 254 aa18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 SIX2Q9NPC8 291 aa18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 PLCB1Q9NQ66 1216 aa18.3■□□□□ 0.52
TSPAN4-205ENST00000397406 EPHB6O15197 1021 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 ZNF623O75123 536 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 NOL4O94818 638 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 NFICP08651 508 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 AKAP5P24588 427 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 RAB27AP51159 221 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 APBA1Q02410 837 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 TRIM14Q14142 442 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 XKR4Q5GH76 650 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 TDRD10Q5VZ19 366 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 JADE1Q6IE81 842 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 CCDC186Q7Z3E2 898 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 RTN4RL1Q86UN2 441 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 SEMA4DQ92854 862 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 NUP58Q9BVL2 599 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 APOL6Q9BWW8 343 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 MTMR12Q9C0I1 747 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 INTS2Q9H0H0 1204 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 GANQ9H2C0 597 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 RGS18Q9NS28 235 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 FAM207AQ9NSI2 230 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 CNTN3Q9P232 1028 aa18.29■□□□□ 0.52
TSPAN4-205ENST00000397406 TDRD15B5MCY1 1934 aaKnown RBP18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 A0A0U1RQF3 1178 aa18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 GOLGA6L6A8MZA4 724 aa18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 RNF225M0QZC1 329 aaPredicted RBP18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 LRRN2O75325 713 aa18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 VNN1O95497 513 aa18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 ATF7P17544 494 aaPredicted RBP18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 YARSP54577 528 aaKnown RBP18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 CETN1Q12798 172 aa18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 DUOXA2Q1HG44 320 aa18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 TRIM65Q6PJ69 517 aa18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 FAM43BQ6ZT52 329 aaPredicted RBP18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 EHBP1Q8NDI1 1231 aa18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 FBXL13Q8NEE6 735 aa18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 TAS1R2Q8TE23 839 aa18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 FTHL17Q9BXU8 183 aa18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 DERAQ9Y315 318 aa18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 C2CD2Q9Y426 696 aa18.28■□□□□ 0.52
TSPAN4-205ENST00000397406 ABHD14A-ACY1A0A1B0GW23 586 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 MEIS3P2A8K0S8 358 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 C9IYK1 514 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 TRIM21P19474 475 aaKnown RBP18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 CASP14P31944 242 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 TFAMQ00059 246 aaKnown RBP18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 TMEM132DQ14C87 1099 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 KLHDC7AQ5VTJ3 777 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 PPFIBP1Q86W92 1011 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 NT5DC4Q86YG4 428 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 NEK11Q8NG66 645 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 CPLX3Q8WVH0 158 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 PPM1EQ8WY54 764 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 SEPT8Q92599 483 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 APBB2Q92870 758 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 IQCDQ96DY2 449 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 ZMAT2Q96NC0 199 aaKnown RBP18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 GAS2L1Q99501 681 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 TSPYL2Q9H2G4 693 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 RAB20Q9NX57 234 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 KLK14Q9P0G3 267 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 PARP2Q9UGN5 583 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 CAPN11Q9UMQ6 739 aa18.27■□□□□ 0.52
TSPAN4-205ENST00000397406 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 A0A1W2PQJ5 194 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 LPXNO60711 386 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 GJB5O95377 273 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 HLA-DRAP01903 254 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 PTMAP06454 111 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 TMEM191BP0C7N4 346 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 SKIP12755 728 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 ITGA4P13612 1032 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 IGFBP4P22692 258 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms