RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 UBE3AQ05086 875 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 NCBP1Q09161 790 aaKnown RBP14.37□□□□□ -0.11
SEC13-209ENST00000397117 TCF15Q12870 199 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 FAM187BQ17R55 369 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 VWA3BQ502W6 1294 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 FKBP15Q5T1M5 1219 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 FBXL6Q8N531 539 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 RDH13Q8NBN7 331 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 SPC24Q8NBT2 197 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 SUSD6Q92537 303 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 PRIMPOLQ96LW4 560 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 ACO2Q99798 780 aaKnown RBP14.37□□□□□ -0.11
SEC13-209ENST00000397117 TLE6Q9H808 572 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 MINDY3Q9H8M7 445 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.37□□□□□ -0.11
SEC13-209ENST00000397117 LGALS16A8MUM7 142 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 CLDN3O15551 220 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 MGEA5O60502 916 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 CSDE1O75534 798 aaKnown RBP14.37□□□□□ -0.11
SEC13-209ENST00000397117 TOM1L1O75674 476 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 PTMAP06454 111 aaKnown RBP14.37□□□□□ -0.11
SEC13-209ENST00000397117 KRT13P13646 458 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 ATF7P17544 494 aaPredicted RBP14.37□□□□□ -0.11
SEC13-209ENST00000397117 PPP2R3AQ06190 1150 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 ATF7IP2Q5U623 682 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 TCERG1LQ5VWI1 586 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 TRIM59Q8IWR1 403 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 GPD1LQ8N335 351 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 VN1R2Q8NFZ6 395 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 SAAL1Q96ER3 474 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 OSMRQ99650 979 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 MSTO1Q9BUK6 570 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 NDST4Q9H3R1 872 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 KIAA1586Q9HCI6 787 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 ERVK-5Q9HDB9 667 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 AGO2Q9UKV8 859 aaKnown RBP14.37□□□□□ -0.11
SEC13-209ENST00000397117 LRFN2Q9ULH4 789 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 STYXL1Q9Y6J8 313 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 GOLGA8IPA6NC78 632 aa14.36□□□□□ -0.11
SEC13-209ENST00000397117 GOLGA8JA6NMD2 632 aa14.36□□□□□ -0.11
SEC13-209ENST00000397117 PER2O15055 1255 aa14.36□□□□□ -0.11
SEC13-209ENST00000397117 MAPK13O15264 365 aa14.36□□□□□ -0.11
SEC13-209ENST00000397117 EDN1P05305 212 aa14.36□□□□□ -0.11
SEC13-209ENST00000397117 CRYBB1P53674 252 aaPredicted RBP14.36□□□□□ -0.11
SEC13-209ENST00000397117 ERVFC1P60507 584 aa14.36□□□□□ -0.11
SEC13-209ENST00000397117 RBM10P98175 930 aaKnown RBP14.36□□□□□ -0.11
SEC13-209ENST00000397117 PCBP1Q15365 356 aaKnown RBP eCLIP14.36□□□□□ -0.11
SEC13-209ENST00000397117 SNRNP35Q16560 246 aaKnown RBP14.36□□□□□ -0.11
SEC13-209ENST00000397117 DUSP6Q16828 381 aa14.36□□□□□ -0.11
SEC13-209ENST00000397117 DCAF17Q5H9S7 520 aaPredicted RBP14.36□□□□□ -0.11
SEC13-209ENST00000397117 INTS8Q75QN2 995 aaKnown RBP14.36□□□□□ -0.11
SEC13-209ENST00000397117 ASIC4Q96FT7 647 aa14.36□□□□□ -0.11
SEC13-209ENST00000397117 CDHR5Q9HBB8 845 aa14.36□□□□□ -0.11
SEC13-209ENST00000397117 INTS13Q9NVM9 706 aa14.36□□□□□ -0.11
SEC13-209ENST00000397117 NOC2LQ9Y3T9 749 aaKnown RBP14.36□□□□□ -0.11
SEC13-209ENST00000397117 PCDHB7Q9Y5E2 793 aa14.36□□□□□ -0.11
SEC13-209ENST00000397117 PCDHB12Q9Y5F1 795 aa14.36□□□□□ -0.11
SEC13-209ENST00000397117 ZFHX2Q9C0A1 2572 aaPredicted RBP14.36□□□□□ -0.11
SEC13-209ENST00000397117 CNTNAP2Q9UHC6 1331 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 A0A0B4J269 797 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 TULP1O00294 542 aaPredicted RBP14.35□□□□□ -0.11
SEC13-209ENST00000397117 FSCN2O14926 492 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 TEX33O43247 280 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 B4GALT5O43286 388 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 EXTL3O43909 919 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 LDHAP00338 332 aaKnown RBP14.35□□□□□ -0.11
SEC13-209ENST00000397117 HARSP12081 509 aaKnown RBP14.35□□□□□ -0.11
SEC13-209ENST00000397117 DARSP14868 501 aaKnown RBP14.35□□□□□ -0.11
SEC13-209ENST00000397117 SFPQP23246 707 aaKnown RBP eCLIP14.35□□□□□ -0.11
SEC13-209ENST00000397117 EIF4BP23588 611 aaKnown RBP14.35□□□□□ -0.11
SEC13-209ENST00000397117 SIGLEC14Q08ET2 396 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 NFX1Q12986 1120 aaKnown RBP14.35□□□□□ -0.11
SEC13-209ENST00000397117 KCNC3Q14003 757 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 MIIPQ5JXC2 388 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 MPZL3Q6UWV2 235 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 TMEM184AQ6ZMB5 413 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 CATSPER4Q7RTX7 472 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 TMC6Q7Z403 805 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 ZBTB33Q86T24 672 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 USP37Q86T82 979 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 VSTM4Q8IW00 320 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 SUGP1Q8IWZ8 645 aaKnown RBP14.35□□□□□ -0.11
SEC13-209ENST00000397117 MICAL1Q8TDZ2 1067 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 ZBTB45Q96K62 511 aaPredicted RBP14.35□□□□□ -0.11
SEC13-209ENST00000397117 RPGRIP1Q96KN7 1286 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 CDCA3Q99618 268 aaPredicted RBP14.35□□□□□ -0.11
SEC13-209ENST00000397117 FAM213AQ9BRX8 229 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 S1PR5Q9H228 398 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 TLR9Q9NR96 1032 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 RGS18Q9NS28 235 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 TNFSF13BQ9Y275 285 aa14.35□□□□□ -0.11
SEC13-209ENST00000397117 ZNF233A6NK53 670 aa14.34□□□□□ -0.11
SEC13-209ENST00000397117 TTLL13PA6NNM8 815 aa14.34□□□□□ -0.11
SEC13-209ENST00000397117 C9IYK1 514 aa14.34□□□□□ -0.11
SEC13-209ENST00000397117 FGF18O76093 207 aa14.34□□□□□ -0.11
SEC13-209ENST00000397117 FAM189BP81408 668 aa14.34□□□□□ -0.11
SEC13-209ENST00000397117 BFSP1Q12934 665 aa14.34□□□□□ -0.11
SEC13-209ENST00000397117 NOLC1Q14978 699 aaKnown RBP eCLIP14.34□□□□□ -0.112e-6■■■■■ 27.8
SEC13-209ENST00000397117 AMHR2Q16671 573 aa14.34□□□□□ -0.11
SEC13-209ENST00000397117 ZNF568Q3ZCX4 644 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms