RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 MYMKA6NI61 221 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 H7C4K7 107 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 HNRNPA1P09651 372 aaKnown RBP eCLIP15.18■□□□□ 0.02
SEC13-204ENST00000397099 HOXA9P31269 272 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 BECN1Q14457 450 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 PTPN21Q16825 1174 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 UVSSAQ2YD98 709 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 RTP2Q5QGT7 225 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 LIN9Q5TKA1 542 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 LILRA6Q6PI73 481 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 TMC5Q6UXY8 1006 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 CCDC149Q6ZUS6 474 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 SUGP1Q8IWZ8 645 aaKnown RBP15.18■□□□□ 0.02
SEC13-204ENST00000397099 ZDHHC14Q8IZN3 488 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 APPL2Q8NEU8 664 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 HASPINQ8TF76 798 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 ACCSQ96QU6 501 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 ASB7Q9H672 318 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 TMEM206Q9H813 350 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 KBTBD4Q9NVX7 518 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 TFIP11Q9UBB9 837 aaKnown RBP15.18■□□□□ 0.02
SEC13-204ENST00000397099 MTRRQ9UBK8 725 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 MAFFQ9ULX9 164 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 STYXL1Q9Y6J8 313 aa15.18■□□□□ 0.02
SEC13-204ENST00000397099 VWA8A3KMH1 1905 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 CCDC195A0A1B0GUA6 201 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 KIAA0391O15091 583 aaKnown RBP15.17■□□□□ 0.02
SEC13-204ENST00000397099 TGM5O43548 720 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 PPP1R37O75864 691 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 LDHAP00338 332 aaKnown RBP15.17■□□□□ 0.02
SEC13-204ENST00000397099 POU2F2P09086 479 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 CXCL8P10145 99 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 IDEP14735 1019 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 NMT1P30419 496 aaKnown RBP15.17■□□□□ 0.02
SEC13-204ENST00000397099 ME1P48163 572 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 RAB33AQ14088 237 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 L1TD1Q5T7N2 865 aaKnown RBP15.17■□□□□ 0.02
SEC13-204ENST00000397099 CNNM4Q6P4Q7 775 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 SFR1Q86XK3 245 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 NT5DC4Q86YG4 428 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 TDRD5Q8NAT2 981 aaKnown RBP15.17■□□□□ 0.02
SEC13-204ENST00000397099 KREMEN2Q8NCW0 462 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 RABGGTAQ92696 567 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 ZMAT2Q96NC0 199 aaKnown RBP15.17■□□□□ 0.02
SEC13-204ENST00000397099 STRA6Q9BX79 667 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 CXCL16Q9H2A7 254 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 PANK4Q9NVE7 773 aa15.17■□□□□ 0.02
SEC13-204ENST00000397099 C2CD4DB7Z1M9 353 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 FAM189A1O60320 539 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 GCNT3O95395 438 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 LRPAP1P30533 357 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 SIGLEC14Q08ET2 396 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 ZBTB6Q15916 424 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 ADALQ6DHV7 355 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 PALB2Q86YC2 1186 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 UBALD2Q8IYN6 164 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 PDILTQ8N807 584 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 BEST2Q8NFU1 509 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 KIF12Q96FN5 646 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 SUSD3Q96L08 255 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 CLSTN3Q9BQT9 956 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 PANK2Q9BZ23 570 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 FBXW11Q9UKB1 542 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 CPSF3Q9UKF6 684 aaKnown RBP15.16■□□□□ 0.02
SEC13-204ENST00000397099 RCOR1Q9UKL0 485 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 AGO2Q9UKV8 859 aaKnown RBP15.16■□□□□ 0.02
SEC13-204ENST00000397099 C2CD2Q9Y426 696 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 C2orf16Q68DN1 1984 aa15.16■□□□□ 0.02
SEC13-204ENST00000397099 XYLBO75191 536 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 ZMYND10O75800 440 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 IL18RAPO95256 599 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 MYBP10242 640 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 GARTP22102 1010 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 KRT85P78386 507 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 SOX4Q06945 474 aaPredicted RBP15.15■□□□□ 0.02
SEC13-204ENST00000397099 ENOX2Q16206 610 aaKnown RBP15.15■□□□□ 0.02
SEC13-204ENST00000397099 E2F4Q16254 413 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 ZC2HC1CQ53FD0 456 aaPredicted RBP15.15■□□□□ 0.02
SEC13-204ENST00000397099 AXDND1Q5T1B0 1012 aaPredicted RBP15.15■□□□□ 0.02
SEC13-204ENST00000397099 SLC8B1Q6J4K2 584 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 PRSS55Q6UWB4 352 aaPredicted RBP15.15■□□□□ 0.02
SEC13-204ENST00000397099 BMP8AQ7Z5Y6 402 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 SYCP3Q8IZU3 236 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 POMGNT1Q8WZA1 660 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 B3GALT6Q96L58 329 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 PRKD2Q9BZL6 878 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 HAPLN2Q9GZV7 340 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 PIDD1Q9HB75 910 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 GOLGA2P5Q9HBQ8 144 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 WDR6Q9NNW5 1121 aaKnown RBP15.15■□□□□ 0.02
SEC13-204ENST00000397099 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.15■□□□□ 0.02
SEC13-204ENST00000397099 CACNG4Q9UBN1 327 aa15.15■□□□□ 0.02
SEC13-204ENST00000397099 ZFP37Q9Y6Q3 630 aaPredicted RBP15.15■□□□□ 0.02
SEC13-204ENST00000397099 A0A087X0B3 334 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 LACTBL1A8MY62 500 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 EIF3DO15371 548 aaKnown RBP eCLIP15.14■□□□□ 0.01
SEC13-204ENST00000397099 MCM4P33991 863 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 MTMR3Q13615 1198 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 VARS2Q5ST30 1063 aaKnown RBP15.14■□□□□ 0.01
SEC13-204ENST00000397099 FOXD4L5Q5VV16 416 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms