RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 MXRA8Q9BRK3 442 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 MAP3K13O43283 966 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 THAP12O43422 761 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 UNC5CO95185 931 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 ASMTLO95671 621 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 DNAJC3Q13217 504 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 MOGSQ13724 837 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 MCOLN2Q8IZK6 566 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 MORC4Q8TE76 937 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 SLC7A6OSQ96CW6 309 aaPredicted RBP14.84□□□□□ -0.03
NUP98-204ENST00000397004 KLHL11Q9NVR0 708 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 UVRAGQ9P2Y5 699 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 ASTN2O75129 1339 aaPredicted RBP14.84□□□□□ -0.03
NUP98-204ENST00000397004 NFIBO00712 420 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 ATP9AO75110 1047 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 GPC3P51654 580 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 CCNHP51946 323 aaPredicted RBP14.83□□□□□ -0.04
NUP98-204ENST00000397004 CCDC142Q17RM4 750 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 PLEKHG4Q58EX7 1191 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 FAM182AQ5T1J6 154 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 SV2AQ7L0J3 742 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 TEX2Q8IWB9 1127 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 MAGEB18Q96M61 343 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 ACCSQ96QU6 501 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 TEKT3Q9BXF9 490 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 NSRP1Q9H0G5 558 aaKnown RBP14.83□□□□□ -0.04
NUP98-204ENST00000397004 SLC24A3Q9HC58 644 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 ZNF536O15090 1300 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 PMM2O15305 246 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 ANKRD20A2Q5SQ80 823 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 ANKRD20A1Q5TYW2 823 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 ANKRD20A3Q5VUR7 823 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 MIS18BP1Q6P0N0 1132 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 ANAPC5Q9UJX4 755 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 BANF1O75531 89 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 GNAZP19086 355 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 TARSP26639 723 aaKnown RBP14.83□□□□□ -0.04
NUP98-204ENST00000397004 ADCY8P40145 1251 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 GAD2Q05329 585 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 DGKZQ13574 1117 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 LMBRD2Q68DH5 695 aaPredicted RBP14.83□□□□□ -0.04
NUP98-204ENST00000397004 RNF43Q68DV7 783 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 TMEM161BQ8NDZ6 487 aa14.83□□□□□ -0.04
NUP98-204ENST00000397004 C12orf65Q9H3J6 166 aaKnown RBP14.83□□□□□ -0.04
NUP98-204ENST00000397004 SORBS3O60504 671 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 MAPK4P31152 587 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 PSMC4P43686 418 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 CYP4F22Q6NT55 531 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 CSRNP1Q96S65 589 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 STMN4Q9H169 189 aaPredicted RBP14.82□□□□□ -0.04
NUP98-204ENST00000397004 TMEM206Q9H813 350 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 ETNK1Q9HBU6 452 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 LARSQ9P2J5 1176 aaKnown RBP14.82□□□□□ -0.04
NUP98-204ENST00000397004 PTPRJQ12913 1337 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 MUTP22033 750 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 NCKAP1LP55160 1127 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 SLC8A3P57103 927 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 STXBP4Q6ZWJ1 553 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 SPIRE2Q8WWL2 714 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 TMX2Q9Y320 296 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 CNGA1P29973 690 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 STX2P32856 288 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 SLC1A5Q15758 541 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 PKN2Q16513 984 aaKnown RBP14.82□□□□□ -0.04
NUP98-204ENST00000397004 SPOPLQ6IQ16 392 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 CROCCP2Q86T23 111 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 LDHDQ86WU2 507 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 CNKSR1Q969H4 720 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 TRAIPQ9BWF2 469 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 TAOK3Q9H2K8 898 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 RAB20Q9NX57 234 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 HAO1Q9UJM8 370 aa14.82□□□□□ -0.04
NUP98-204ENST00000397004 A0A1W2PPM1 405 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 CCNE2O96020 404 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 CD58P19256 250 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 CCND1P24385 295 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 FMNL3Q8IVF7 1028 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 KIAA1683Q9H0B3 1180 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 KIAA1586Q9HCI6 787 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 NOP53Q9NZM5 478 aaKnown RBP14.81□□□□□ -0.04
NUP98-204ENST00000397004 KRT10P13645 584 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 YWHABP31946 246 aaKnown RBP14.81□□□□□ -0.04
NUP98-204ENST00000397004 RPA3P35244 121 aaPredicted RBP14.81□□□□□ -0.04
NUP98-204ENST00000397004 MFAP3P55082 362 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 KRT39Q6A163 491 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 MIER3Q7Z3K6 550 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 TRABD2AQ86V40 505 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 KANSL3Q9P2N6 904 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.81□□□□□ -0.04
NUP98-204ENST00000397004 RASA4BC9J798 803 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 RASA4O43374 803 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 PEX11AO75192 247 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 SMNDC1O75940 238 aaKnown RBP eCLIP14.81□□□□□ -0.04
NUP98-204ENST00000397004 ACVR2BQ13705 512 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 TMED2Q15363 201 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 IZUMO3Q5VZ72 239 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 TXNRD3NBQ6F5E7 133 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 ZNF276Q8N554 614 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 ERP27Q96DN0 273 aa14.81□□□□□ -0.04
NUP98-204ENST00000397004 RIT2Q99578 217 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms