RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 SLC8B1Q6J4K2 584 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 VITQ6UXI7 678 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 ANKS3Q6ZW76 656 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 MAP4K3Q8IVH8 894 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 CELF5Q8N6W0 485 aaKnown RBP17.44■□□□□ 0.38
SNCA-205ENST00000394991 MCPH1Q8NEM0 835 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 NETO1Q8TDF5 533 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 CORO1BQ9BR76 489 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 ADPGKQ9BRR6 497 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 TM6SF1Q9BZW5 370 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 C2orf40Q9H1Z8 148 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 ZFP14Q9HCL3 533 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 RAB23Q9ULC3 237 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 CFAP47Q6ZTR5 3102 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 ACKR2O00590 384 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 CDKL5O76039 1030 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 ABLIM3O94929 683 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 SEC24AO95486 1093 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 RETP07949 1114 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 ATP2B1P20020 1258 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 KRT2P35908 639 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 NRLP54845 237 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 SATB1Q01826 763 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 SOX4Q06945 474 aaPredicted RBP17.43■□□□□ 0.38
SNCA-205ENST00000394991 DMWDQ09019 674 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 GAS6Q14393 721 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 PRR23BQ6ZRT6 265 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 ZNF461Q8TAF7 563 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 FAM3CQ92520 227 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 ZSWIM3Q96MP5 696 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 ASB16Q96NS5 453 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 MTMR9Q96QG7 549 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 IER2Q9BTL4 223 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 TRMT61BQ9BVS5 477 aaKnown RBP17.43■□□□□ 0.38
SNCA-205ENST00000394991 LMAN1LQ9HAT1 526 aa17.43■□□□□ 0.38
SNCA-205ENST00000394991 ZNF334Q9HCZ1 680 aaPredicted RBP17.43■□□□□ 0.38
SNCA-205ENST00000394991 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.42■□□□□ 0.38
SNCA-205ENST00000394991 PRRG1O14668 218 aa17.42■□□□□ 0.38
SNCA-205ENST00000394991 MOSPD3O75425 235 aa17.42■□□□□ 0.38
SNCA-205ENST00000394991 MED24O75448 989 aa17.42■□□□□ 0.38
SNCA-205ENST00000394991 GDI1P31150 447 aa17.42■□□□□ 0.38
SNCA-205ENST00000394991 CCR3P51677 355 aa17.42■□□□□ 0.38
SNCA-205ENST00000394991 DCAF4L1Q3SXM0 396 aa17.42■□□□□ 0.38
SNCA-205ENST00000394991 UROC1Q96N76 676 aa17.42■□□□□ 0.38
SNCA-205ENST00000394991 KIFC3Q9BVG8 833 aa17.42■□□□□ 0.38
SNCA-205ENST00000394991 PDRG1Q9NUG6 133 aa17.42■□□□□ 0.38
SNCA-205ENST00000394991 INSL5Q9Y5Q6 135 aa17.42■□□□□ 0.38
SNCA-205ENST00000394991 PIAS3Q9Y6X2 628 aa17.42■□□□□ 0.38
SNCA-205ENST00000394991 NEMFO60524 1076 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 LRP3O75074 770 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 CHRNB1P11230 501 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 ELF1P32519 619 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 SRSF5Q13243 272 aaKnown RBP17.41■□□□□ 0.38
SNCA-205ENST00000394991 NT5DC1Q5TFE4 455 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 PRR23CQ6ZRP0 262 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 CATSPER3Q86XQ3 398 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 TCEAL8Q8IYN2 117 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 HS6ST3Q8IZP7 471 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 CEP120Q8N960 986 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 IRF7Q92985 503 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 TMEM60Q9H2L4 133 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 TRPV5Q9NQA5 729 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 SEMA4GQ9NTN9 838 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 ORC3Q9UBD5 711 aaPredicted RBP17.41■□□□□ 0.38
SNCA-205ENST00000394991 TPCN1Q9ULQ1 816 aa17.41■□□□□ 0.38
SNCA-205ENST00000394991 NUP210Q8TEM1 1887 aaPredicted RBP17.41■□□□□ 0.38
SNCA-205ENST00000394991 SMIM28A0A1B0GU29 152 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 CHURC1-FNTBB4DL54 471 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 HRO43593 1189 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 TRAPPC3O43617 180 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 GDF9O60383 454 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 PFKFB2O60825 505 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 MICAL2O94851 1124 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 FDPSP14324 419 aaKnown RBP17.4■□□□□ 0.38
SNCA-205ENST00000394991 ATF2P15336 505 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 GJA1P17302 382 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 PSMC3P17980 439 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 VIPR2P41587 438 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 NAMPTP43490 491 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 FNTBP49356 437 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 ARPP19P56211 112 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 SIM2Q14190 667 aaPredicted RBP17.4■□□□□ 0.38
SNCA-205ENST00000394991 WDR44Q5JSH3 913 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 PDZD4Q76G19 769 aaPredicted RBP17.4■□□□□ 0.38
SNCA-205ENST00000394991 DEPTORQ8TB45 409 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 SMARCD2Q92925 531 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 CYP4F11Q9HBI6 524 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 POLD4Q9HCU8 107 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 TUFT1Q9NNX1 390 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 EML5Q05BV3 1969 aa17.4■□□□□ 0.38
SNCA-205ENST00000394991 CEP295Q9C0D2 2601 aa17.39■□□□□ 0.37
SNCA-205ENST00000394991 ARNTLO00327 626 aa17.39■□□□□ 0.37
SNCA-205ENST00000394991 ZNF197O14709 1029 aa17.39■□□□□ 0.37
SNCA-205ENST00000394991 CYP11B2P19099 503 aa17.39■□□□□ 0.37
SNCA-205ENST00000394991 CCNE1P24864 410 aa17.39■□□□□ 0.37
SNCA-205ENST00000394991 CXCL12P48061 93 aa17.39■□□□□ 0.37
SNCA-205ENST00000394991 MRPL58Q14197 206 aaKnown RBP17.39■□□□□ 0.37
SNCA-205ENST00000394991 PPP2R5DQ14738 602 aa17.39■□□□□ 0.37
SNCA-205ENST00000394991 CSRP2Q16527 193 aa17.39■□□□□ 0.37
SNCA-205ENST00000394991 ATF7IP2Q5U623 682 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms