RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CCDC60Q8IWA6 550 aaPredicted RBP14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 JPH1Q9HDC5 661 aaPredicted RBP14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 GOLGA6L7A0A1B0GV03 622 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 C5orf60A6NFR6 353 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 ATP2A1O14983 1001 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 TCF4P15884 667 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 MAPK4P31152 587 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 SP2Q02086 613 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 SGO2Q562F6 1265 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 ANKRD20A8PQ5CZ79 823 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 XRRA1Q6P2D8 792 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 GADL1Q6ZQY3 521 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 MICALCLQ6ZW33 695 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 CACNA2D3Q8IZS8 1091 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 ANKRD35Q8N283 1001 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 UPF1Q92900 1129 aaKnown RBP eCLIP14.4□□□□□ -0.19e-8■■■■□ 19.8
GTF2F1-201ENST00000394456 CHMP6Q96FZ7 201 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 BICD1Q96G01 975 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 SLC40A1Q9NP59 571 aa14.4□□□□□ -0.1
GTF2F1-201ENST00000394456 EDN1P05305 212 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 GTF2A1P52655 376 aaPredicted RBP14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 DRG2P55039 364 aaKnown RBP14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 EIF3BP55884 814 aaKnown RBP14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 NLRP11P59045 1033 aaKnown RBP14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 ADCY2Q08462 1091 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 CYP1B1Q16678 543 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 ATP13A4Q4VNC1 1196 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 HOOK3Q86VS8 718 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 SULF1Q8IWU6 871 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 DCPSQ96C86 337 aaKnown RBP14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 CLMNQ96JQ2 1002 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 CCDC114Q96M63 670 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 ELAC2Q9BQ52 826 aaKnown RBP14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 ELP3Q9H9T3 547 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 BTBD7Q9P203 1132 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 SLC9A2Q9UBY0 812 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 ASIC3Q9UHC3 531 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 SEPT9Q9UHD8 586 aaPredicted RBP14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 COQ4Q9Y3A0 265 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 MYPNQ86TC9 1320 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 CETPP11597 493 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 SCP2P22307 547 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 MNAT1P51948 309 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 TAS2R40P59535 323 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 ACTR2P61160 394 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 ALCAMQ13740 583 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 TCEAL1Q15170 157 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 KYNUQ16719 465 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 YTHDF3Q7Z739 585 aaKnown RBP14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 EXOC3L1Q86VI1 746 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 TMEM143Q96AN5 459 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 OTUD5Q96G74 571 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 MFSD14AQ96MC6 490 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 ST6GALNAC4Q9H4F1 302 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 ANKEF1Q9NU02 776 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 CSADQ9Y600 493 aa14.39□□□□□ -0.11
GTF2F1-201ENST00000394456 RASGRF2O14827 1237 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 ECEL1O95672 775 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 GH1P01241 217 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 IVDP26440 423 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 MPP2Q14168 576 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 MCOLN2Q8IZK6 566 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 CYP4X1Q8N118 509 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 TMEM130Q8N3G9 435 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 ACSF2Q96CM8 615 aaPredicted RBP14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 PGM2Q96G03 612 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 C11orf70Q9BRQ4 267 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 R3HDMLQ9H3Y0 253 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 APOBEC3GQ9HC16 384 aaKnown RBP14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 ADARB2Q9NS39 739 aaKnown RBP14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 USTQ9Y2C2 406 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 ATXN2Q99700 1313 aaKnown RBP14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 IRF6O14896 467 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 HGSO14964 777 aaPredicted RBP14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 UNGP13051 313 aaPredicted RBP14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 CD58P19256 250 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 SCTRP47872 440 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 SMTNP53814 917 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 PRKCEQ02156 737 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 MTERF2Q49AM1 385 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 SH3D19Q5HYK7 790 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 HP1BP3Q5SSJ5 553 aaPredicted RBP14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 GLIS1Q8NBF1 620 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 INTS9Q9NV88 658 aaKnown RBP14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 TBK1Q9UHD2 729 aa14.38□□□□□ -0.11
GTF2F1-201ENST00000394456 TTLL13PA6NNM8 815 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 PI4K2BG5E9Z4 385 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 PODXLO00592 558 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 FSCN2O14926 492 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 MAFGO15525 162 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 PSAPP07602 524 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 VIMP08670 466 aaKnown RBP14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 HARSP12081 509 aaKnown RBP14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 PSMC4P43686 418 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 ITGA8P53708 1063 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 GKAP1Q5VSY0 366 aaPredicted RBP14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 TDRD10Q5VZ19 366 aaKnown RBP14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 CCT6BQ92526 530 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 ATP6V0A1Q93050 837 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms