RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 CLSTN1O94985 981 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 ADCYAP1R1P41586 468 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 ZNF132P52740 706 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 NOGQ13253 232 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 DUSP28Q4G0W2 176 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 GJC2Q5T442 439 aaPredicted RBP20.61■□□□□ 0.89
GMDS-201ENST00000380805 DCAF12L1Q5VU92 463 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 SPOPLQ6IQ16 392 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 TRIM72Q6ZMU5 477 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 PLEKHH3Q7Z736 793 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 AFG1LQ8WV93 481 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 ELMO3Q96BJ8 720 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 NUB1Q9Y5A7 615 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 MANSC4A6NHS7 340 aaPredicted RBP20.61■□□□□ 0.89
GMDS-201ENST00000380805 HOXC6P09630 235 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 MYBL1P10243 752 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 PHKA2P46019 1235 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 CENPCQ03188 943 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 SEZ6Q53EL9 994 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 EMBQ6PCB8 327 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 ZBTB33Q86T24 672 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 CD101Q93033 1021 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 ZNF653Q96CK0 615 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 TRIM11Q96F44 468 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 NLRP4Q96MN2 994 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 KRT12Q99456 494 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 TCHPQ9BT92 498 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 ABHD16BQ9H3Z7 469 aa20.61■□□□□ 0.89
GMDS-201ENST00000380805 SLC15A5A6NIM6 579 aa20.6■□□□□ 0.89
GMDS-201ENST00000380805 HARSP12081 509 aaKnown RBP20.6■□□□□ 0.89
GMDS-201ENST00000380805 AARSP49588 968 aaKnown RBP eCLIP20.6■□□□□ 0.89
GMDS-201ENST00000380805 EPHB4P54760 987 aa20.6■□□□□ 0.89
GMDS-201ENST00000380805 FAM193AP78312 1265 aa20.6■□□□□ 0.89
GMDS-201ENST00000380805 SLC7A5Q01650 507 aa20.6■□□□□ 0.89
GMDS-201ENST00000380805 GPS2Q13227 327 aa20.6■□□□□ 0.89
GMDS-201ENST00000380805 PPP1R2P3Q6NXS1 205 aa20.6■□□□□ 0.89
GMDS-201ENST00000380805 IFT20Q8IY31 132 aa20.6■□□□□ 0.89
GMDS-201ENST00000380805 ZNF564Q8TBZ8 553 aaPredicted RBP20.6■□□□□ 0.89
GMDS-201ENST00000380805 CAVIN3Q969G5 261 aa20.6■□□□□ 0.89
GMDS-201ENST00000380805 TINF2Q9BSI4 451 aa20.6■□□□□ 0.89
GMDS-201ENST00000380805 IMPG2Q9BZV3 1241 aa20.6■□□□□ 0.89
GMDS-201ENST00000380805 ACBD3Q9H3P7 528 aa20.6■□□□□ 0.89
GMDS-201ENST00000380805 MINDY3Q9H8M7 445 aa20.6■□□□□ 0.89
GMDS-201ENST00000380805 INO80B-WBP1J3KQ70 363 aa20.59■□□□□ 0.89
GMDS-201ENST00000380805 IGF2BP3O00425 579 aaKnown RBP eCLIP20.59■□□□□ 0.89
GMDS-201ENST00000380805 GJB1P08034 283 aa20.59■□□□□ 0.89
GMDS-201ENST00000380805 GLI1P08151 1106 aa20.59■□□□□ 0.89
GMDS-201ENST00000380805 NNTQ13423 1086 aa20.59■□□□□ 0.89
GMDS-201ENST00000380805 AMHR2Q16671 573 aa20.59■□□□□ 0.89
GMDS-201ENST00000380805 DUOXA2Q1HG44 320 aa20.59■□□□□ 0.89
GMDS-201ENST00000380805 ZNF568Q3ZCX4 644 aa20.59■□□□□ 0.89
GMDS-201ENST00000380805 DPP9Q86TI2 863 aa20.59■□□□□ 0.89
GMDS-201ENST00000380805 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.59■□□□□ 0.89
GMDS-201ENST00000380805 NAP1L3Q99457 506 aaPredicted RBP20.59■□□□□ 0.89
GMDS-201ENST00000380805 NUP85Q9BW27 656 aa20.59■□□□□ 0.89
GMDS-201ENST00000380805 INO80BQ9C086 356 aaPredicted RBP20.59■□□□□ 0.89
GMDS-201ENST00000380805 CDT1Q9H211 546 aa20.59■□□□□ 0.89
GMDS-201ENST00000380805 SLITRK6Q9H5Y7 841 aa20.59■□□□□ 0.89
GMDS-201ENST00000380805 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.58■□□□□ 0.89
GMDS-201ENST00000380805 B4GALT5O43286 388 aa20.58■□□□□ 0.89
GMDS-201ENST00000380805 PHACTR2O75167 634 aa20.58■□□□□ 0.89
GMDS-201ENST00000380805 HEXIM1O94992 359 aaKnown RBP20.58■□□□□ 0.89
GMDS-201ENST00000380805 CTNNA2P26232 953 aa20.58■□□□□ 0.89
GMDS-201ENST00000380805 PTPROQ16827 1216 aa20.58■□□□□ 0.89
GMDS-201ENST00000380805 EEF1DP3Q658K8 133 aa20.58■□□□□ 0.89
GMDS-201ENST00000380805 IQSEC1Q6DN90 963 aa20.58■□□□□ 0.89
GMDS-201ENST00000380805 MCOLN2Q8IZK6 566 aa20.58■□□□□ 0.89
GMDS-201ENST00000380805 ALG3Q92685 438 aa20.58■□□□□ 0.89
GMDS-201ENST00000380805 FAXDC2Q96IV6 333 aa20.58■□□□□ 0.89
GMDS-201ENST00000380805 ZSWIM1Q9BR11 485 aa20.58■□□□□ 0.89
GMDS-201ENST00000380805 WNT8AQ9H1J5 351 aa20.58■□□□□ 0.89
GMDS-201ENST00000380805 ZCCHC17Q9NP64 241 aaKnown RBP20.58■□□□□ 0.89
GMDS-201ENST00000380805 ST7Q9NRC1 585 aa20.58■□□□□ 0.89
GMDS-201ENST00000380805 HPCAL4Q9UM19 191 aa20.58■□□□□ 0.89
GMDS-201ENST00000380805 TULP1O00294 542 aaPredicted RBP20.58■□□□□ 0.88
GMDS-201ENST00000380805 RAD51CO43502 376 aa20.58■□□□□ 0.88
GMDS-201ENST00000380805 IL18RAPO95256 599 aa20.58■□□□□ 0.88
GMDS-201ENST00000380805 IQCF3P0C7M6 154 aa20.58■□□□□ 0.88
GMDS-201ENST00000380805 SMPD1P17405 629 aa20.58■□□□□ 0.88
GMDS-201ENST00000380805 OAS2P29728 719 aaKnown RBP20.58■□□□□ 0.88
GMDS-201ENST00000380805 TM4SF4P48230 202 aa20.58■□□□□ 0.88
GMDS-201ENST00000380805 PEX5P50542 639 aa20.58■□□□□ 0.88
GMDS-201ENST00000380805 ACVR2BQ13705 512 aa20.58■□□□□ 0.88
GMDS-201ENST00000380805 PPP2R5EQ16537 467 aa20.58■□□□□ 0.88
GMDS-201ENST00000380805 SGSM1Q2NKQ1 1148 aa20.58■□□□□ 0.88
GMDS-201ENST00000380805 GSPT2Q8IYD1 628 aaKnown RBP20.58■□□□□ 0.88
GMDS-201ENST00000380805 UBL4BQ8N7F7 174 aa20.58■□□□□ 0.88
GMDS-201ENST00000380805 DNAJC5GQ8N7S2 189 aa20.58■□□□□ 0.88
GMDS-201ENST00000380805 RBBP8NLQ8NC74 664 aaPredicted RBP20.58■□□□□ 0.88
GMDS-201ENST00000380805 VCPIP1Q96JH7 1222 aa20.58■□□□□ 0.88
GMDS-201ENST00000380805 RNPC3Q96LT9 517 aaKnown RBP20.58■□□□□ 0.88
GMDS-201ENST00000380805 MTMR12Q9C0I1 747 aa20.58■□□□□ 0.88
GMDS-201ENST00000380805 CNOT8Q9UFF9 292 aaKnown RBP20.58■□□□□ 0.88
GMDS-201ENST00000380805 UMODL1Q5DID0 1318 aa20.58■□□□□ 0.88
GMDS-201ENST00000380805 H3BQF6 201 aa20.57■□□□□ 0.88
GMDS-201ENST00000380805 H3BRB1 525 aa20.57■□□□□ 0.88
GMDS-201ENST00000380805 KRIT1O00522 736 aa20.57■□□□□ 0.88
GMDS-201ENST00000380805 ATMINO43313 823 aaPredicted RBP20.57■□□□□ 0.88
GMDS-201ENST00000380805 CST3P01034 146 aaPredicted RBP20.57■□□□□ 0.88
GMDS-201ENST00000380805 MMP3P08254 477 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms