RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 NFU1Q9UMS0 254 aa24.73■■□□□ 1.55
VPS16-201ENST00000380443 PTPRJQ12913 1337 aa24.73■■□□□ 1.55
VPS16-201ENST00000380443 MAGEB2O15479 319 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 GH1P01241 217 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 SRGAP2CP0DJJ0 459 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 COMTP21964 271 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 WNT7BP56706 349 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 NOP14P78316 857 aaKnown RBP24.72■■□□□ 1.55
VPS16-201ENST00000380443 MRPS25P82663 173 aaKnown RBP24.72■■□□□ 1.55
VPS16-201ENST00000380443 CENPCQ03188 943 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 PTPROQ16827 1216 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 SEL1L2Q5TEA6 688 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 SEC14L1Q92503 715 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 CAPNS2Q96L46 248 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 RUNDC3BQ96NL0 473 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 ACP6Q9NPH0 428 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 FAM114A2Q9NRY5 505 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 MORF4L1Q9UBU8 362 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 CPSF3Q9UKF6 684 aaKnown RBP24.72■■□□□ 1.55
VPS16-201ENST00000380443 PCDHA3Q9Y5H8 950 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 FAM187AA6NFU0 413 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 CYP2C19P33261 490 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 CTNNA1P35221 906 aaKnown RBP24.72■■□□□ 1.55
VPS16-201ENST00000380443 SLC1A1P43005 524 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 PEX5P50542 639 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 DHX34Q14147 1143 aaKnown RBP24.72■■□□□ 1.55
VPS16-201ENST00000380443 DUOXA2Q1HG44 320 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 ZBTB41Q5SVQ8 909 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 CYP4F22Q6NT55 531 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 MPZL3Q6UWV2 235 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 ANKRD23Q86SG2 305 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 EFCAB13Q8IY85 973 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 MCOLN2Q8IZK6 566 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 RAB17Q9H0T7 212 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 EFCC1Q9HA90 598 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.72■■□□□ 1.55
VPS16-201ENST00000380443 FAN1Q9Y2M0 1017 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 PCDHB4Q9Y5E5 795 aa24.72■■□□□ 1.55
VPS16-201ENST00000380443 COL1A2P08123 1366 aa24.71■■□□□ 1.55
VPS16-201ENST00000380443 GOLGA8KD6RF30 607 aa24.71■■□□□ 1.55
VPS16-201ENST00000380443 ABLIM1O14639 778 aa24.71■■□□□ 1.55
VPS16-201ENST00000380443 GGCXP38435 758 aa24.71■■□□□ 1.55
VPS16-201ENST00000380443 VEGFBP49765 207 aa24.71■■□□□ 1.55
VPS16-201ENST00000380443 LIN9Q5TKA1 542 aa24.71■■□□□ 1.55
VPS16-201ENST00000380443 TRIM50Q86XT4 487 aa24.71■■□□□ 1.55
VPS16-201ENST00000380443 ALG3Q92685 438 aa24.71■■□□□ 1.55
VPS16-201ENST00000380443 FAXDC2Q96IV6 333 aa24.71■■□□□ 1.55
VPS16-201ENST00000380443 DDX47Q9H0S4 455 aaKnown RBP24.71■■□□□ 1.55
VPS16-201ENST00000380443 PTPRHQ9HD43 1115 aa24.71■■□□□ 1.55
VPS16-201ENST00000380443 UTP11Q9Y3A2 253 aaKnown RBP24.71■■□□□ 1.55
VPS16-201ENST00000380443 AGPSO00116 658 aa24.7■■□□□ 1.55
VPS16-201ENST00000380443 ASS1P00966 412 aaKnown RBP24.7■■□□□ 1.55
VPS16-201ENST00000380443 NSFP46459 744 aaKnown RBP24.7■■□□□ 1.55
VPS16-201ENST00000380443 ARHGAP1Q07960 439 aa24.7■■□□□ 1.55
VPS16-201ENST00000380443 FAM187BQ17R55 369 aa24.7■■□□□ 1.55
VPS16-201ENST00000380443 SGSM1Q2NKQ1 1148 aa24.7■■□□□ 1.55
VPS16-201ENST00000380443 RHPN2Q8IUC4 686 aa24.7■■□□□ 1.55
VPS16-201ENST00000380443 GDAP1L1Q96MZ0 367 aa24.7■■□□□ 1.55
VPS16-201ENST00000380443 RUFY1Q96T51 708 aa24.7■■□□□ 1.55
VPS16-201ENST00000380443 SH3GL2Q99962 352 aa24.7■■□□□ 1.55
VPS16-201ENST00000380443 APOBEC3GQ9HC16 384 aaKnown RBP24.7■■□□□ 1.55
VPS16-201ENST00000380443 PRMT7Q9NVM4 692 aaPredicted RBP24.7■■□□□ 1.55
VPS16-201ENST00000380443 TNFSF13BQ9Y275 285 aa24.7■■□□□ 1.55
VPS16-201ENST00000380443 PDHXO00330 501 aa24.7■■□□□ 1.54
VPS16-201ENST00000380443 SPOPO43791 374 aa24.7■■□□□ 1.54
VPS16-201ENST00000380443 RNF40O75150 1001 aa24.7■■□□□ 1.54
VPS16-201ENST00000380443 EFCAB12Q6NXP0 572 aa24.7■■□□□ 1.54
VPS16-201ENST00000380443 IFNLR1Q8IU57 520 aaPredicted RBP24.7■■□□□ 1.54
VPS16-201ENST00000380443 LRRC71Q8N4P6 559 aa24.7■■□□□ 1.54
VPS16-201ENST00000380443 OR5B17Q8NGF7 314 aa24.7■■□□□ 1.54
VPS16-201ENST00000380443 LRRC45Q96CN5 670 aa24.7■■□□□ 1.54
VPS16-201ENST00000380443 HINFPQ9BQA5 517 aa24.7■■□□□ 1.54
VPS16-201ENST00000380443 LCMT1Q9UIC8 334 aa24.7■■□□□ 1.54
VPS16-201ENST00000380443 B4GALT4O60513 344 aa24.69■■□□□ 1.54
VPS16-201ENST00000380443 IL18RAPO95256 599 aa24.69■■□□□ 1.54
VPS16-201ENST00000380443 CYP2C8P10632 490 aa24.69■■□□□ 1.54
VPS16-201ENST00000380443 ITGA4P13612 1032 aa24.69■■□□□ 1.54
VPS16-201ENST00000380443 CHRNA3P32297 505 aa24.69■■□□□ 1.54
VPS16-201ENST00000380443 RWDD2BP57060 319 aa24.69■■□□□ 1.54
VPS16-201ENST00000380443 PPFIA1Q13136 1202 aa24.69■■□□□ 1.54
VPS16-201ENST00000380443 KYAT1Q16773 422 aa24.69■■□□□ 1.54
VPS16-201ENST00000380443 ATF7IP2Q5U623 682 aa24.69■■□□□ 1.54
VPS16-201ENST00000380443 TAPT1Q6NXT6 567 aa24.69■■□□□ 1.54
VPS16-201ENST00000380443 UBR7Q8N806 425 aa24.69■■□□□ 1.54
VPS16-201ENST00000380443 PPTC7Q8NI37 304 aa24.69■■□□□ 1.54
VPS16-201ENST00000380443 TMEM110-MUSTN1A8MSY1 372 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 HARSP12081 509 aaKnown RBP24.68■■□□□ 1.54
VPS16-201ENST00000380443 GNA15P30679 374 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 GBP1P32455 592 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 HSPA9P38646 679 aaKnown RBP24.68■■□□□ 1.54
VPS16-201ENST00000380443 PHKA2P46019 1235 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 RBBP8NLQ8NC74 664 aaPredicted RBP24.68■■□□□ 1.54
VPS16-201ENST00000380443 COPS5Q92905 334 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 MS4A4AQ96JQ5 239 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 MRPL47Q9HD33 250 aaKnown RBP24.68■■□□□ 1.54
VPS16-201ENST00000380443 PDGFCQ9NRA1 345 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 RASAL2Q9UJF2 1139 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 MTUS1Q9ULD2 1270 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 NUB1Q9Y5A7 615 aa24.68■■□□□ 1.54
VPS16-201ENST00000380443 IVNS1ABPQ9Y6Y0 642 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms