RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 THEGQ9P2T0 379 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 KLHL3Q9UH77 587 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 DNAJC16Q9Y2G8 782 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 GPSM3Q9Y4H4 160 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 FTCDO95954 541 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 HOXB7P09629 217 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 ATP6V1B1P15313 513 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 ACVR2BQ13705 512 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 C6orf118Q5T5N4 469 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 C4orf22Q6V702 233 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 COL23A1Q86Y22 540 aaPredicted RBP9.9□□□□□ -0.82
PTPRA-204ENST00000380393 CENPSQ8N2Z9 138 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 LSMEM1Q8N8F7 131 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 USP38Q8NB14 1042 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 ZNF594Q96JF6 807 aaPredicted RBP9.9□□□□□ -0.82
PTPRA-204ENST00000380393 TTC1Q99614 292 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 ZBED2Q9BTP6 218 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 CADM1Q9BY67 442 aaKnown RBP9.9□□□□□ -0.82
PTPRA-204ENST00000380393 TRIM31Q9BZY9 425 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 NT5C3AQ9H0P0 336 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 MTRF1LQ9UGC7 380 aaKnown RBP9.9□□□□□ -0.82
PTPRA-204ENST00000380393 SALL4Q9UJQ4 1053 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 MYH6P13533 1939 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 KCPQ6ZWJ8 1503 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 ADAMTS7Q9UKP4 1686 aa9.9□□□□□ -0.82
PTPRA-204ENST00000380393 SGTAO43765 313 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 EYA4O95677 639 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 TFAP2AP05549 437 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 ADSLP30566 484 aaPredicted RBP9.9□□□□□ -0.83
PTPRA-204ENST00000380393 CLK3P49761 638 aaKnown RBP9.9□□□□□ -0.83
PTPRA-204ENST00000380393 ASPHQ12797 758 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 STK4Q13043 487 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 GCKRQ14397 625 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 GRM2Q14416 872 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 RRAGBQ5VZM2 374 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 CGB2Q6NT52 195 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 TYW1BQ6NUM6 668 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 ISLR2Q6UXK2 745 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 ITIH5Q86UX2 942 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 PLPP6Q8IY26 295 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 VPS52Q8N1B4 723 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 NPLOC4Q8TAT6 608 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 PTCD2Q8WV60 388 aaKnown RBP9.9□□□□□ -0.83
PTPRA-204ENST00000380393 UQCC2Q9BRT2 126 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 PITPNM3Q9BZ71 974 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 RNF38Q9H0F5 515 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 CEP72Q9P209 647 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 PDS5AQ29RF7 1337 aaKnown RBP9.9□□□□□ -0.83
PTPRA-204ENST00000380393 MRC1P22897 1456 aa9.9□□□□□ -0.83
PTPRA-204ENST00000380393 TMEM120BA0PK00 339 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 DCTN3O75935 186 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 ABCB1P08183 1280 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 PLEKP08567 350 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 CYP19A1P11511 503 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 ZNF12P17014 697 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 CRABP2P29373 138 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 MAGEA1P43355 309 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 CHN2P52757 468 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 THOP1P52888 689 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 TRIM71Q2Q1W2 868 aaKnown RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 BBS9Q3SYG4 887 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 NIPAL1Q6NVV3 410 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 LLGL2Q6P1M3 1020 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 CYP4V2Q6ZWL3 525 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 NOSTRINQ8IVI9 506 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 C7orf57Q8NEG2 295 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 LILRB4Q8NHJ6 448 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 FERD3LQ96RJ6 166 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 FMO2Q99518 471 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 MIPEPQ99797 713 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 MRPL1Q9BYD6 325 aaKnown RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 OSBPL6Q9BZF3 934 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 ZMYND12Q9H0C1 365 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 NLRC4Q9NPP4 1024 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 DDX56Q9NY93 547 aaKnown RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 SLC12A7Q9Y666 1083 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 PALLDQ8WX93 1383 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 NEURL1BA8MQ27 555 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 B4E1Z4 1266 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 AQP9O43315 295 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 STX2P32856 288 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 VCPP55072 806 aaKnown RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 DR1Q01658 176 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 MKRN3Q13064 507 aaKnown RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 MTFR1Q15390 333 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 TXNRD1Q16881 649 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 LSMEM2Q8N112 164 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 MTMR8Q96EF0 704 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 COQ7Q99807 217 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 CALN1Q9BXU9 219 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 DDX47Q9H0S4 455 aaKnown RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 RBM38Q9H0Z9 239 aaKnown RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 TLE6Q9H808 572 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 DBR1Q9UK59 544 aaKnown RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 PACSIN2Q9UNF0 486 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-204ENST00000380393 ERVK-11Q9UQG0 969 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 AK5Q9Y6K8 562 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 ITGB4P16144 1822 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 PPP1R3GB7ZBB8 358 aa9.89□□□□□ -0.83
PTPRA-204ENST00000380393 SNX2O60749 519 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms