RNA–Protein interactions for RNA: ENST00000380249.5

FOCAD-202, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOCAD, Length 6,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-202ENST00000380249 TUBB4AP04350 444 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 CXCL8P10145 99 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 TYMPP19971 482 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 KRT17Q04695 432 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 IQCB1Q15051 598 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 TEX35Q5T0J7 233 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 CRELD2Q6UXH1 353 aaPredicted RBP6.74□□□□□ -1.33
FOCAD-202ENST00000380249 CDR2LQ86X02 465 aaPredicted RBP6.74□□□□□ -1.33
FOCAD-202ENST00000380249 ZNF689Q96CS4 500 aaPredicted RBP6.74□□□□□ -1.33
FOCAD-202ENST00000380249 KIF12Q96FN5 646 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 CPB2Q96IY4 423 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.74□□□□□ -1.33
FOCAD-202ENST00000380249 TBKBP1A7MCY6 615 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 CAPN15O75808 1086 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 ZNF18P17022 549 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 TAF6P49848 677 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 STX17P56962 302 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 CREMQ03060 361 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 SHHQ15465 462 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 SGSM1Q2NKQ1 1148 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 ELMSAN1Q6PJG2 1045 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 TRAPPC11Q7Z392 1133 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 CCDC127Q96BQ5 260 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 SAAL1Q96ER3 474 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 CYP3A43Q9HB55 503 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 PDE11AQ9HCR9 933 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 COL4A6Q14031 1691 aa6.74□□□□□ -1.33
FOCAD-202ENST00000380249 TTLL13PA6NNM8 815 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 SCNN1GP51170 649 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 BIRC3Q13489 604 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 APPL2Q8NEU8 664 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 DPP7Q9UHL4 492 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 TFAMQ00059 246 aaKnown RBP6.73□□□□□ -1.33
FOCAD-202ENST00000380249 SMARCB1Q12824 385 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 SV2AQ7L0J3 742 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 RNF214Q8ND24 703 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 CNOT6LQ96LI5 555 aaKnown RBP6.73□□□□□ -1.33
FOCAD-202ENST00000380249 TUBGCP2Q9BSJ2 902 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 PCIF1Q9H4Z3 704 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 ARL5CA6NH57 179 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 PTGESO14684 152 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 SYN3O14994 580 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 AFPP02771 609 aaKnown RBP6.73□□□□□ -1.33
FOCAD-202ENST00000380249 ERVK-21P61565 698 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 WDR44Q5JSH3 913 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 FAM109BQ6ICB4 259 aaPredicted RBP6.73□□□□□ -1.33
FOCAD-202ENST00000380249 TMEM86AQ8N2M4 240 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 APOL6Q9BWW8 343 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 NGRNQ9NPE2 291 aaKnown RBP6.73□□□□□ -1.33
FOCAD-202ENST00000380249 FAN1Q9Y2M0 1017 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 ARID2Q68CP9 1835 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 SF3B1O75533 1304 aaKnown RBP eCLIP6.73□□□□□ -1.337e-9■■■■□ 24.1
FOCAD-202ENST00000380249 LACTBL1A8MY62 500 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 EDN1P05305 212 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 BMPR1AP36894 532 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 NCAPHQ15003 741 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 SV2CQ496J9 727 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 ZNF667Q5HYK9 610 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 ISM2Q6H9L7 571 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 KCNT2Q6UVM3 1135 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 HELQQ8TDG4 1101 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 BORCS6Q96GS4 357 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 TGS1Q96RS0 853 aaKnown RBP6.73□□□□□ -1.33
FOCAD-202ENST00000380249 RNF39Q9H2S5 420 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 PLCB1Q9NQ66 1216 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 LMCD1Q9NZU5 365 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 FBXL5Q9UKA1 691 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 INPP5FQ9Y2H2 1132 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 IRAK3Q9Y616 596 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 CCDC66A2RUB6 948 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 MLH1P40692 756 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 GBP6Q6ZN66 633 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 NDST4Q9H3R1 872 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 HES2Q9Y543 173 aa6.73□□□□□ -1.33
FOCAD-202ENST00000380249 A0A1W2PQC6 194 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 KCNJ18B7U540 433 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 ASS1P00966 412 aaKnown RBP6.72□□□□□ -1.33
FOCAD-202ENST00000380249 TBXAS1P24557 533 aaPredicted RBP6.72□□□□□ -1.33
FOCAD-202ENST00000380249 DEFB103AP81534 67 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 GCNT1Q02742 428 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 KCNJ12Q14500 433 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 C15orf39Q6ZRI6 1047 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 IRF2BP1Q8IU81 584 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 SLC39A11Q8N1S5 342 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 RNF19AQ9NV58 838 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 MAFFQ9ULX9 164 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 USP20Q9Y2K6 914 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 TRIM49BA6NDI0 452 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 C5orf67F2Z3F1 127 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 B3GAT3O94766 335 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 FMO5P49326 533 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 C9orf50Q5SZB4 431 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.72□□□□□ -1.33
FOCAD-202ENST00000380249 C11orf57Q6ZUT1 292 aaPredicted RBP6.72□□□□□ -1.33
FOCAD-202ENST00000380249 MED15Q96RN5 788 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 FANCLQ9NW38 375 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 GDAP2Q9NXN4 497 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 MYO7AQ13402 2215 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 GOLGA8IPA6NC78 632 aa6.72□□□□□ -1.33
FOCAD-202ENST00000380249 GOLGA8JA6NMD2 632 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms