RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 OSGEPL1Q9H4B0 414 aa14.84□□□□□ -0.03
TRIM13-202ENST00000378182 DMAP1Q9NPF5 467 aaPredicted RBP14.84□□□□□ -0.03
TRIM13-202ENST00000378182 C17orf102A2RUQ5 167 aa14.83□□□□□ -0.03
TRIM13-202ENST00000378182 ADCY3O60266 1144 aa14.83□□□□□ -0.03
TRIM13-202ENST00000378182 SYNCRIPO60506 623 aaKnown RBP14.83□□□□□ -0.03
TRIM13-202ENST00000378182 PDHA1P08559 390 aa14.83□□□□□ -0.03
TRIM13-202ENST00000378182 ZFXP17010 805 aaPredicted RBP14.83□□□□□ -0.03
TRIM13-202ENST00000378182 SPATS2Q86XZ4 545 aaKnown RBP14.83□□□□□ -0.03
TRIM13-202ENST00000378182 TMA16Q96EY4 203 aaKnown RBP14.83□□□□□ -0.03
TRIM13-202ENST00000378182 GIMAP4Q9NUV9 329 aa14.83□□□□□ -0.03
TRIM13-202ENST00000378182 DDX56Q9NY93 547 aaKnown RBP14.83□□□□□ -0.03
TRIM13-202ENST00000378182 PODXLO00592 558 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 SP100P23497 879 aaPredicted RBP14.83□□□□□ -0.04
TRIM13-202ENST00000378182 CYP4A22Q5TCH4 519 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 CLEC10AQ8IUN9 316 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 SPACA7Q96KW9 195 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 TMEM39BQ9GZU3 492 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 MAPKBP1O60336 1514 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 CETPP11597 493 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 SF3B3Q15393 1217 aaKnown RBP14.83□□□□□ -0.04
TRIM13-202ENST00000378182 C6orf10Q5SRN2 563 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 DEPDC1Q5TB30 811 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 ALS2CLQ60I27 953 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 SLC44A2Q8IWA5 706 aaPredicted RBP14.83□□□□□ -0.04
TRIM13-202ENST00000378182 MCEEQ96PE7 176 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 STRBPQ96SI9 672 aaKnown RBP14.83□□□□□ -0.04
TRIM13-202ENST00000378182 FKBP9O95302 570 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 OCA2Q04671 838 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 CUL3Q13618 768 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 NFIXQ14938 502 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 FKBP9P1Q75LS8 142 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 CEP72Q9P209 647 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 PQBP1O60828 265 aaKnown RBP14.83□□□□□ -0.04
TRIM13-202ENST00000378182 LARGE1O95461 756 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 CARSP49589 748 aaKnown RBP14.83□□□□□ -0.04
TRIM13-202ENST00000378182 NR1H3Q13133 447 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 PTPRN2Q92932 1015 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 HPS3Q969F9 1004 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 MYOZ2Q9NPC6 264 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 CYP27B1O15528 508 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 GSNP06396 782 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 PLIN5Q00G26 463 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 KYAT1Q16773 422 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 CCDC142Q17RM4 750 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 KLHL38Q2WGJ6 581 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 CNOT10Q9H9A5 744 aaKnown RBP14.83□□□□□ -0.04
TRIM13-202ENST00000378182 BFARQ9NZS9 450 aa14.83□□□□□ -0.04
TRIM13-202ENST00000378182 CCDC85CA6NKD9 419 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 PCDH8O95206 1070 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 MBL2P11226 248 aaPredicted RBP14.82□□□□□ -0.04
TRIM13-202ENST00000378182 IFNAR1P17181 557 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 CHRM3P20309 590 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 DEUP1Q05D60 604 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 MTM1Q13496 603 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 NCAPHQ15003 741 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 SHCBP1Q8NEM2 672 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 SCFD1Q8WVM8 642 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 CINPQ9BW66 212 aaPredicted RBP14.82□□□□□ -0.04
TRIM13-202ENST00000378182 ZNF556Q9HAH1 456 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.82□□□□□ -0.042e-6■■□□□ 13.2
TRIM13-202ENST00000378182 PTPRTO14522 1441 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 ADGRL3Q9HAR2 1447 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 ASAP2O43150 1006 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 CYP2C9P11712 490 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 GRAMD4Q6IC98 578 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 PHACTR4Q8IZ21 702 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 CCDC33Q8N5R6 958 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 FAM162AQ96A26 154 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 FAM129AQ9BZQ8 928 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.82□□□□□ -0.041e-8■■■■■ 29.9
TRIM13-202ENST00000378182 AVPR1AP37288 418 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 MED21Q13503 144 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 TMEM169Q96HH4 297 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 SMTNL2Q2TAL5 461 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 SV2CQ496J9 727 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 SP8Q8IXZ3 490 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 ZMAT2Q96NC0 199 aaKnown RBP14.82□□□□□ -0.04
TRIM13-202ENST00000378182 C3orf70A6NLC5 250 aaPredicted RBP14.82□□□□□ -0.04
TRIM13-202ENST00000378182 ASS1P00966 412 aaKnown RBP14.82□□□□□ -0.04
TRIM13-202ENST00000378182 PLEKHA8Q96JA3 519 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 FAM20AQ96MK3 541 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 GLT1D1Q96MS3 346 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 NMRK2Q9NPI5 230 aa14.82□□□□□ -0.04
TRIM13-202ENST00000378182 C20orf96Q9NUD7 363 aaPredicted RBP14.82□□□□□ -0.04
TRIM13-202ENST00000378182 DCDC2CA8MYV0 355 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 EZH2Q15910 746 aaKnown RBP14.81□□□□□ -0.04
TRIM13-202ENST00000378182 ZC3H15Q8WU90 426 aaKnown RBP14.81□□□□□ -0.04
TRIM13-202ENST00000378182 FAM118BQ9BPY3 351 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 A0A087WUV0 522 aaPredicted RBP14.81□□□□□ -0.04
TRIM13-202ENST00000378182 A0A1W2PQ27 194 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 A0A1W2PQ64 194 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 A0A1W2PQD8 194 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 TARSL2A2RTX5 802 aaKnown RBP14.81□□□□□ -0.04
TRIM13-202ENST00000378182 MIER2Q8N344 545 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 AHCYL2Q96HN2 611 aaKnown RBP14.81□□□□□ -0.04
TRIM13-202ENST00000378182 DCP1AQ9NPI6 582 aaPredicted RBP14.81□□□□□ -0.04
TRIM13-202ENST00000378182 FAM47E-STBD1D6RA91 191 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 CDC25BP30305 580 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 RBP5P82980 135 aa14.81□□□□□ -0.04
TRIM13-202ENST00000378182 NT5DC4Q86YG4 428 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms