RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 REXO1Q8N1G1 1221 aaKnown RBP12.41□□□□□ -0.42
NPHP4-202ENST00000378161 PAGE5Q96GU1 130 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 C8orf48Q96LL4 319 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 SMYD3Q9H7B4 428 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 RSL24D1Q9UHA3 163 aaKnown RBP12.41□□□□□ -0.42
NPHP4-202ENST00000378161 SNX24Q9Y343 169 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 TESPA1A2RU30 521 aaPredicted RBP12.41□□□□□ -0.42
NPHP4-202ENST00000378161 PABPC4LP0CB38 370 aaKnown RBP12.41□□□□□ -0.42
NPHP4-202ENST00000378161 CCDC130P13994 396 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 OLR1P78380 273 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 DNAL1Q4LDG9 190 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 SYCP2LQ5T4T6 812 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 CYP4V2Q6ZWL3 525 aaPredicted RBP12.41□□□□□ -0.42
NPHP4-202ENST00000378161 ADAT2Q7Z6V5 191 aaKnown RBP12.41□□□□□ -0.42
NPHP4-202ENST00000378161 GRAMD2AQ8IUY3 354 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 TRIM39Q9HCM9 518 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 CNOT8Q9UFF9 292 aaKnown RBP12.41□□□□□ -0.42
NPHP4-202ENST00000378161 AP4S1Q9Y587 144 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 TAF6LQ9Y6J9 622 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 MROH2AA6NES4 1674 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 S100A5P33763 92 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 RNF43Q68DV7 783 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 SHC4Q6S5L8 630 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 LRRC6Q86X45 466 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 PLEKHO2Q8TD55 490 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 SLC35B4Q969S0 331 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 CNBD2Q96M20 576 aa12.41□□□□□ -0.42
NPHP4-202ENST00000378161 TRPC5Q9UL62 973 aaPredicted RBP12.41□□□□□ -0.42
NPHP4-202ENST00000378161 DIP2CQ9Y2E4 1556 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 FAM196BA6NMK8 535 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 BAIAP3O94812 1187 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 EPHB1P54762 984 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 OASLQ15646 514 aaKnown RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 CALCRLQ16602 461 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 TRMT5Q32P41 509 aaKnown RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 HERC4Q5GLZ8 1057 aaPredicted RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 RSBN1Q5VWQ0 802 aaPredicted RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 KRT26Q7Z3Y9 468 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 CTAGE3PQ8IX95 158 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 PNMA1Q8ND90 353 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 THTPAQ9BU02 230 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 DENND2DQ9H6A0 471 aaPredicted RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 STX18Q9P2W9 335 aaKnown RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 FBXO2Q9UK22 296 aaPredicted RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 CAPN11Q9UMQ6 739 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 JAG2Q9Y219 1238 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 MAP2P11137 1827 aaKnown RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 TMEM114B3SHH9 223 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 IDH3BO43837 385 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 ACSL3O95573 720 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 RFC4P35249 363 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 MCAMP43121 646 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 PMS1P54277 932 aaKnown RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 GFPT1Q06210 699 aaPredicted RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 DCAF17Q5H9S7 520 aaPredicted RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 CATSPER3Q86XQ3 398 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 LACRTQ9GZZ8 138 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 KIAA1586Q9HCI6 787 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 AMACRQ9UHK6 382 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 CEMIPQ8WUJ3 1361 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 SH3PXD2BA1X283 911 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 LRRC10BA6NIK2 292 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 LGALS16A8MUM7 142 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 B2RBV5 119 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 FAM47E-STBD1D6RA91 191 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 TNFRSF10AO00220 468 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 PRPF3O43395 683 aaKnown RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 CSPG5O95196 566 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 OR52Z1P0C646 297 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 TMED2Q15363 201 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 MRPS26Q9BYN8 205 aaKnown RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 GLT8D2Q9H1C3 349 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 RAD21L1Q9H4I0 556 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 MOV10Q9HCE1 1003 aaKnown RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 PCDH12Q9NPG4 1184 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 INTS13Q9NVM9 706 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 ARMCX3Q9UH62 379 aaPredicted RBP12.4□□□□□ -0.42
NPHP4-202ENST00000378161 TEKT2Q9UIF3 430 aa12.4□□□□□ -0.42
NPHP4-202ENST00000378161 UTYO14607 1347 aa12.4□□□□□ -0.43
NPHP4-202ENST00000378161 FAM13AO94988 1023 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 TRIM16O95361 564 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 CBX6O95503 412 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 HSPA1LP34931 641 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 HIC1Q14526 733 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 TBC1D10CQ8IV04 446 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 ZBED8Q8IZ13 594 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 OR6Y1Q8NGX8 325 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 NLRP4Q96MN2 994 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 KIAA1683Q9H0B3 1180 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 APOBEC2Q9Y235 224 aaKnown RBP12.39□□□□□ -0.43
NPHP4-202ENST00000378161 SHPRHQ149N8 1683 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 LAD1O00515 517 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 CRYZL1O95825 349 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
NPHP4-202ENST00000378161 BPHLQ86WA6 291 aaPredicted RBP12.39□□□□□ -0.43
NPHP4-202ENST00000378161 IRGQQ8WZA9 623 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 BTBD10Q9BSF8 475 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 PPARGC1AQ9UBK2 798 aaKnown RBP12.39□□□□□ -0.43
NPHP4-202ENST00000378161 HDAC9Q9UKV0 1011 aa12.39□□□□□ -0.43
NPHP4-202ENST00000378161 F8W031 263 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms