RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 RHOBTB2Q9BYZ6 727 aa18.32■□□□□ 0.52
HMGN4-201ENST00000377575 ZDHHC7Q9NXF8 308 aa18.32■□□□□ 0.52
HMGN4-201ENST00000377575 NUB1Q9Y5A7 615 aa18.32■□□□□ 0.52
HMGN4-201ENST00000377575 FAM86C2PA6NEL3 165 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 FAM189A1O60320 539 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 PPP1R37O75864 691 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 GCNT3O95395 438 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 TKTP29401 623 aaKnown RBP18.31■□□□□ 0.52
HMGN4-201ENST00000377575 BRCC3P46736 316 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 AMPD3Q01432 767 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 ENOX2Q16206 610 aaKnown RBP18.31■□□□□ 0.52
HMGN4-201ENST00000377575 E2F4Q16254 413 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 LIN9Q5TKA1 542 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 CD300LGQ6UXG3 332 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 CD302Q8IX05 232 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 CCDC65Q8IXS2 484 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 IQUBQ8NA54 791 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 KREMEN2Q8NCW0 462 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 DHX58Q96C10 678 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 CLSTN3Q9BQT9 956 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 MAGEF1Q9HAY2 307 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 C11orf16Q9NQ32 467 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 PANK4Q9NVE7 773 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 TBC1D7Q9P0N9 293 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 MTRRQ9UBK8 725 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 TUBGCP4Q9UGJ1 667 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 FBXW11Q9UKB1 542 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 UBQLN1Q9UMX0 589 aaKnown RBP18.31■□□□□ 0.52
HMGN4-201ENST00000377575 USTQ9Y2C2 406 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 PCDHB13Q9Y5F0 798 aa18.31■□□□□ 0.52
HMGN4-201ENST00000377575 CCDC195A0A1B0GUA6 201 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 PRR33A8MZF0 331 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 C2CD4DB7Z1M9 353 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 I3L4J1 428 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 SYN3O14994 580 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 SPATA31D3P0C874 917 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 CYP3A5P20815 502 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 MCM4P33991 863 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 DNM1Q05193 864 aaKnown RBP18.3■□□□□ 0.52
HMGN4-201ENST00000377575 POSTNQ15063 836 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 ZBTB41Q5SVQ8 909 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 AXDND1Q5T1B0 1012 aaPredicted RBP18.3■□□□□ 0.52
HMGN4-201ENST00000377575 L1TD1Q5T7N2 865 aaKnown RBP18.3■□□□□ 0.52
HMGN4-201ENST00000377575 ADALQ6DHV7 355 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 LILRA6Q6PI73 481 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 SHC4Q6S5L8 630 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 SPATA31D4Q6ZUB0 917 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 POMGNT1Q8WZA1 660 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 ACCSQ96QU6 501 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 LRFN3Q9BTN0 628 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 FAM13BQ9NYF5 915 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 CPSF3Q9UKF6 684 aaKnown RBP18.3■□□□□ 0.52
HMGN4-201ENST00000377575 AGO2Q9UKV8 859 aaKnown RBP18.3■□□□□ 0.52
HMGN4-201ENST00000377575 STYXL1Q9Y6J8 313 aa18.3■□□□□ 0.52
HMGN4-201ENST00000377575 LACTBL1A8MY62 500 aa18.29■□□□□ 0.52
HMGN4-201ENST00000377575 ANKRD63C9JTQ0 380 aa18.29■□□□□ 0.52
HMGN4-201ENST00000377575 RFPL2O75678 378 aa18.29■□□□□ 0.52
HMGN4-201ENST00000377575 PAPLNO95428 1278 aa18.29■□□□□ 0.52
HMGN4-201ENST00000377575 IGFBP6P24592 240 aaPredicted RBP18.29■□□□□ 0.52
HMGN4-201ENST00000377575 LRPAP1P30533 357 aa18.29■□□□□ 0.52
HMGN4-201ENST00000377575 STXBP4Q6ZWJ1 553 aa18.29■□□□□ 0.52
HMGN4-201ENST00000377575 PLCD3Q8N3E9 789 aa18.29■□□□□ 0.52
HMGN4-201ENST00000377575 SMG7Q92540 1137 aaKnown RBP18.29■□□□□ 0.52
HMGN4-201ENST00000377575 STAMQ92783 540 aa18.29■□□□□ 0.52
HMGN4-201ENST00000377575 ACSF2Q96CM8 615 aaPredicted RBP18.29■□□□□ 0.52
HMGN4-201ENST00000377575 PYM1Q9BRP8 204 aaKnown RBP18.29■□□□□ 0.52
HMGN4-201ENST00000377575 STRA6Q9BX79 667 aa18.29■□□□□ 0.52
HMGN4-201ENST00000377575 PIDD1Q9HB75 910 aa18.29■□□□□ 0.52
HMGN4-201ENST00000377575 KBTBD4Q9NVX7 518 aa18.29■□□□□ 0.52
HMGN4-201ENST00000377575 PCDHA7Q9UN72 937 aa18.29■□□□□ 0.52
HMGN4-201ENST00000377575 BACE2Q9Y5Z0 518 aa18.29■□□□□ 0.52
HMGN4-201ENST00000377575 TRIOO75962 3097 aa18.29■□□□□ 0.52
HMGN4-201ENST00000377575 CLUHO75153 1309 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 TCHHQ07283 1943 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 H7C4K7 107 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 ZMYND10O75800 440 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 ADRB2P07550 413 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 MYBP10242 640 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 OR1D2P34982 312 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 POU5F1Q01860 360 aaKnown RBP18.28■□□□□ 0.52
HMGN4-201ENST00000377575 SPAG1Q07617 926 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 RAB33AQ14088 237 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 PTPN21Q16825 1174 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 VARS2Q5ST30 1063 aaKnown RBP18.28■□□□□ 0.52
HMGN4-201ENST00000377575 OTOP3Q7RTS5 596 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 ZDHHC14Q8IZN3 488 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 SYCP3Q8IZU3 236 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 BEST2Q8NFU1 509 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 EDAQ92838 391 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 FAM212AQ96EL1 285 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 SUSD3Q96L08 255 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 TRIM9Q9C026 710 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 DERAQ9Y315 318 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 CDY1Q9Y6F8 540 aa18.28■□□□□ 0.52
HMGN4-201ENST00000377575 TISP43B9A030 160 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 POLR2DO15514 142 aaKnown RBP18.27■□□□□ 0.52
HMGN4-201ENST00000377575 ADAM12O43184 909 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 HNRNPA1P09651 372 aaKnown RBP eCLIP18.27■□□□□ 0.52
HMGN4-201ENST00000377575 COL9A1P20849 921 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 ACOT2P49753 483 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms