RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 TPCN2Q8NHX9 752 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 RFFLQ8WZ73 363 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 ANKRD36BP1Q96IX9 119 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 CAPZA3Q96KX2 299 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 OSBPL9Q96SU4 736 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 GCOM2Q9BZD3 368 aaPredicted RBP18.98■□□□□ 0.63
CTTN-203ENST00000376561 THAP2Q9H0W7 228 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 TSKSQ9UJT2 592 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 MYADML2A6NDP7 307 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 TREHO43280 583 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 CLSTN1O94985 981 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 TNNC2P02585 160 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 FTLP02792 175 aaPredicted RBP18.98■□□□□ 0.63
CTTN-203ENST00000376561 TCP1P17987 556 aaKnown RBP18.98■□□□□ 0.63
CTTN-203ENST00000376561 MYL6P60660 151 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 KYAT1Q16773 422 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 MEI1Q5TIA1 1274 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 ADPGKQ9BRR6 497 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 CDHR5Q9HBB8 845 aa18.98■□□□□ 0.63
CTTN-203ENST00000376561 FAM170AA1A519 330 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 MEFVO15553 781 aaPredicted RBP18.97■□□□□ 0.63
CTTN-203ENST00000376561 RTN2O75298 545 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 GJA9P57773 515 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 ZNF200P98182 395 aaPredicted RBP18.97■□□□□ 0.63
CTTN-203ENST00000376561 LRRC57Q8N9N7 239 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 SLC35G2Q8TBE7 412 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 DNAJB3Q8WWF6 145 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 CAPNS2Q96L46 248 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 PCDHB2Q9Y5E7 798 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 LACTBL1A8MY62 500 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 CAP1Q01518 475 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 CKAP4Q07065 602 aaKnown RBP18.97■□□□□ 0.63
CTTN-203ENST00000376561 TRPC3Q13507 836 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 SGSM1Q2NKQ1 1148 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 DEFB115Q30KQ5 88 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 COG1Q8WTW3 980 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 RABGGTAQ92696 567 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 ARHGEF26Q96DR7 871 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 MMS19Q96T76 1030 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 PSMB7Q99436 277 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 OSMRQ99650 979 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 OSGEPQ9NPF4 335 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 CENPFP49454 3210 aa18.97■□□□□ 0.63
CTTN-203ENST00000376561 C17orf102A2RUQ5 167 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 BPIFB4P59827 614 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 SLC10A6Q3KNW5 377 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 CREG2Q8IUH2 290 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 ASB7Q9H672 318 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 CNTN6Q9UQ52 1028 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 PCDHB4Q9Y5E5 795 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 CASP8AP2Q9UKL3 1982 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 KPNA6O60684 536 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 CALCAP01258 141 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 NFICP08651 508 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 DARSP14868 501 aaKnown RBP18.96■□□□□ 0.63
CTTN-203ENST00000376561 HOXA11P31270 313 aaPredicted RBP18.96■□□□□ 0.63
CTTN-203ENST00000376561 HOXC8P31273 242 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 CXCR5P32302 372 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 GNASQ5JWF2 1037 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 TMEM270Q6UE05 265 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 CATSPER4Q7RTX7 472 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 C7orf31Q8N865 590 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 GOLPH3Q9H4A6 298 aa18.96■□□□□ 0.63
CTTN-203ENST00000376561 GNAT1P11488 350 aa18.95■□□□□ 0.62
CTTN-203ENST00000376561 TUBB4BP68371 445 aa18.95■□□□□ 0.62
CTTN-203ENST00000376561 SP3Q02447 781 aa18.95■□□□□ 0.62
CTTN-203ENST00000376561 TRIM32Q13049 653 aa18.95■□□□□ 0.62
CTTN-203ENST00000376561 PCBP1Q15365 356 aaKnown RBP eCLIP18.95■□□□□ 0.621e-13■■■■■ 29.1
CTTN-203ENST00000376561 JADE1Q6IE81 842 aa18.95■□□□□ 0.62
CTTN-203ENST00000376561 SLFN11Q7Z7L1 901 aa18.95■□□□□ 0.62
CTTN-203ENST00000376561 ZNF677Q86XU0 584 aa18.95■□□□□ 0.62
CTTN-203ENST00000376561 REM2Q8IYK8 340 aaPredicted RBP18.95■□□□□ 0.62
CTTN-203ENST00000376561 GPR161Q8N6U8 529 aaKnown RBP18.95■□□□□ 0.62
CTTN-203ENST00000376561 NIF3L1Q9GZT8 377 aa18.95■□□□□ 0.62
CTTN-203ENST00000376561 XYLT2Q9H1B5 865 aa18.95■□□□□ 0.62
CTTN-203ENST00000376561 EPC1Q9H2F5 836 aa18.95■□□□□ 0.62
CTTN-203ENST00000376561 PACSIN2Q9UNF0 486 aaPredicted RBP18.95■□□□□ 0.62
CTTN-203ENST00000376561 PDE2AO00408 941 aaPredicted RBP18.94■□□□□ 0.62
CTTN-203ENST00000376561 SEPT4O43236 478 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 GPC5P78333 572 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 ZNF699Q32M78 642 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 RHOT2Q8IXI1 618 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 CAGE1Q8TC20 777 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 ACAP3Q96P50 834 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 CITO14578 2027 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 PGK1P00558 417 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 ZSCAN20P17040 1043 aaPredicted RBP18.94■□□□□ 0.62
CTTN-203ENST00000376561 EIF4BP23588 611 aaKnown RBP18.94■□□□□ 0.62
CTTN-203ENST00000376561 CACNB2Q08289 660 aaPredicted RBP18.94■□□□□ 0.62
CTTN-203ENST00000376561 DCAF4L1Q3SXM0 396 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 SYCE1Q8N0S2 351 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 UBR7Q8N806 425 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 C1orf127Q8N9H9 656 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 RBBP8NLQ8NC74 664 aaPredicted RBP18.94■□□□□ 0.62
CTTN-203ENST00000376561 RPGRIP1Q96KN7 1286 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 MTG1Q9BT17 334 aaPredicted RBP18.94■□□□□ 0.62
CTTN-203ENST00000376561 UPF3AQ9H1J1 476 aaKnown RBP18.94■□□□□ 0.62
CTTN-203ENST00000376561 SIX4Q9UIU6 781 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 MROH7Q68CQ1 1323 aa18.94■□□□□ 0.62
CTTN-203ENST00000376561 GRM5P41594 1212 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms