RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 FOXQ1Q9C009 403 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 HCFC1R1Q9NWW0 138 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 NUB1Q9Y5A7 615 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 VPS13AQ96RL7 3174 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 GVINP1Q7Z2Y8 2422 aa25.4■■□□□ 1.66
C9orf47-202ENST00000375850 E9PMD0 336 aa25.4■■□□□ 1.66
C9orf47-202ENST00000375850 PRRG1O14668 218 aa25.4■■□□□ 1.66
C9orf47-202ENST00000375850 ATF2P15336 505 aa25.4■■□□□ 1.66
C9orf47-202ENST00000375850 GUCY2CP25092 1073 aa25.4■■□□□ 1.66
C9orf47-202ENST00000375850 SOX4Q06945 474 aaPredicted RBP25.4■■□□□ 1.66
C9orf47-202ENST00000375850 STRN3Q13033 797 aa25.4■■□□□ 1.66
C9orf47-202ENST00000375850 NBR1Q14596 966 aa25.4■■□□□ 1.66
C9orf47-202ENST00000375850 RINT1Q6NUQ1 792 aa25.4■■□□□ 1.66
C9orf47-202ENST00000375850 TCEAL8Q8IYN2 117 aa25.4■■□□□ 1.66
C9orf47-202ENST00000375850 SPIRE2Q8WWL2 714 aa25.4■■□□□ 1.66
C9orf47-202ENST00000375850 FBXO4Q9UKT5 387 aa25.4■■□□□ 1.66
C9orf47-202ENST00000375850 R4GN57 208 aa25.4■■□□□ 1.66
C9orf47-202ENST00000375850 ZNF197O14709 1029 aa25.39■■□□□ 1.66
C9orf47-202ENST00000375850 NCAM2O15394 837 aa25.39■■□□□ 1.66
C9orf47-202ENST00000375850 SEC24BO95487 1268 aa25.39■■□□□ 1.66
C9orf47-202ENST00000375850 TOB1P50616 345 aaPredicted RBP25.39■■□□□ 1.66
C9orf47-202ENST00000375850 SMTNP53814 917 aa25.39■■□□□ 1.66
C9orf47-202ENST00000375850 OSTNP61366 133 aa25.39■■□□□ 1.66
C9orf47-202ENST00000375850 C1orf186Q6ZWK4 172 aa25.39■■□□□ 1.66
C9orf47-202ENST00000375850 APPL2Q8NEU8 664 aa25.39■■□□□ 1.66
C9orf47-202ENST00000375850 KXD1Q9BQD3 176 aa25.39■■□□□ 1.66
C9orf47-202ENST00000375850 KCND2Q9NZV8 630 aa25.39■■□□□ 1.66
C9orf47-202ENST00000375850 PCDHB6Q9Y5E3 794 aa25.39■■□□□ 1.66
C9orf47-202ENST00000375850 VWA8A3KMH1 1905 aa25.38■■□□□ 1.65
C9orf47-202ENST00000375850 I3L4J1 428 aa25.38■■□□□ 1.65
C9orf47-202ENST00000375850 TBC1D4O60343 1298 aa25.38■■□□□ 1.65
C9orf47-202ENST00000375850 TOM1L1O75674 476 aa25.38■■□□□ 1.65
C9orf47-202ENST00000375850 GLULP15104 373 aa25.38■■□□□ 1.65
C9orf47-202ENST00000375850 IGFBP6P24592 240 aaPredicted RBP25.38■■□□□ 1.65
C9orf47-202ENST00000375850 MAPK7Q13164 816 aa25.38■■□□□ 1.65
C9orf47-202ENST00000375850 MRPL58Q14197 206 aaKnown RBP25.38■■□□□ 1.65
C9orf47-202ENST00000375850 TAS1R3Q7RTX0 852 aa25.38■■□□□ 1.65
C9orf47-202ENST00000375850 ST13P5Q8NFI4 369 aaPredicted RBP25.38■■□□□ 1.65
C9orf47-202ENST00000375850 ELSPBP1Q96BH3 223 aa25.38■■□□□ 1.65
C9orf47-202ENST00000375850 ZMAT2Q96NC0 199 aaKnown RBP25.38■■□□□ 1.65
C9orf47-202ENST00000375850 RUSC1Q9BVN2 902 aa25.38■■□□□ 1.65
C9orf47-202ENST00000375850 MRPS17Q9Y2R5 130 aaKnown RBP25.38■■□□□ 1.65
C9orf47-202ENST00000375850 WDR27A2RRH5 827 aa25.37■■□□□ 1.65
C9orf47-202ENST00000375850 H0YCG3 227 aa25.37■■□□□ 1.65
C9orf47-202ENST00000375850 ABLIM1O14639 778 aa25.37■■□□□ 1.65
C9orf47-202ENST00000375850 LAMTOR5O43504 91 aa25.37■■□□□ 1.65
C9orf47-202ENST00000375850 UBXN2BQ14CS0 331 aa25.37■■□□□ 1.65
C9orf47-202ENST00000375850 RILPL1Q5EBL4 403 aa25.37■■□□□ 1.65
C9orf47-202ENST00000375850 ZBTB41Q5SVQ8 909 aa25.37■■□□□ 1.65
C9orf47-202ENST00000375850 ZNF280DQ6N043 979 aa25.37■■□□□ 1.65
C9orf47-202ENST00000375850 ZPBP2Q6X784 338 aa25.37■■□□□ 1.65
C9orf47-202ENST00000375850 ELMOD1Q8N336 334 aa25.37■■□□□ 1.65
C9orf47-202ENST00000375850 LEMD2Q8NC56 503 aa25.37■■□□□ 1.65
C9orf47-202ENST00000375850 DNASE1L2Q92874 299 aa25.37■■□□□ 1.65
C9orf47-202ENST00000375850 SUSD3Q96L08 255 aa25.37■■□□□ 1.65
C9orf47-202ENST00000375850 OXCT2Q9BYC2 517 aaPredicted RBP25.37■■□□□ 1.65
C9orf47-202ENST00000375850 LTB4R2Q9NPC1 389 aa25.37■■□□□ 1.65
C9orf47-202ENST00000375850 FAM170BA6NMN3 283 aa25.36■■□□□ 1.65
C9orf47-202ENST00000375850 SPTLC1O15269 473 aa25.36■■□□□ 1.65
C9orf47-202ENST00000375850 KINO60870 393 aaKnown RBP25.36■■□□□ 1.65
C9orf47-202ENST00000375850 PLS3P13797 630 aa25.36■■□□□ 1.65
C9orf47-202ENST00000375850 NOLC1Q14978 699 aaKnown RBP eCLIP25.36■■□□□ 1.65
C9orf47-202ENST00000375850 HYIQ5T013 277 aa25.36■■□□□ 1.65
C9orf47-202ENST00000375850 ING5Q8WYH8 240 aa25.36■■□□□ 1.65
C9orf47-202ENST00000375850 RUBCNQ92622 972 aa25.36■■□□□ 1.65
C9orf47-202ENST00000375850 MCRS1Q96EZ8 462 aa25.36■■□□□ 1.65
C9orf47-202ENST00000375850 CYP4F11Q9HBI6 524 aa25.36■■□□□ 1.65
C9orf47-202ENST00000375850 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.36■■□□□ 1.65
C9orf47-202ENST00000375850 SPATA6Q9NWH7 488 aaPredicted RBP25.36■■□□□ 1.65
C9orf47-202ENST00000375850 SPTBN4Q9H254 2564 aa25.36■■□□□ 1.65
C9orf47-202ENST00000375850 SLC16A4O15374 487 aa25.35■■□□□ 1.65
C9orf47-202ENST00000375850 SCP2P22307 547 aa25.35■■□□□ 1.65
C9orf47-202ENST00000375850 RPS9P46781 194 aaKnown RBP25.35■■□□□ 1.65
C9orf47-202ENST00000375850 SLC5A9Q2M3M2 681 aa25.35■■□□□ 1.65
C9orf47-202ENST00000375850 CTXN3Q4LDR2 81 aa25.35■■□□□ 1.65
C9orf47-202ENST00000375850 CYP4A22Q5TCH4 519 aa25.35■■□□□ 1.65
C9orf47-202ENST00000375850 IQCEQ6IPM2 695 aa25.35■■□□□ 1.65
C9orf47-202ENST00000375850 ZNF852Q6ZMS4 543 aa25.35■■□□□ 1.65
C9orf47-202ENST00000375850 PLEKHA5Q9HAU0 1116 aa25.35■■□□□ 1.65
C9orf47-202ENST00000375850 FBXL5Q9UKA1 691 aa25.35■■□□□ 1.65
C9orf47-202ENST00000375850 INSL5Q9Y5Q6 135 aa25.35■■□□□ 1.65
C9orf47-202ENST00000375850 PP2D1A8MPX8 630 aa25.34■■□□□ 1.65
C9orf47-202ENST00000375850 MCM4P33991 863 aa25.34■■□□□ 1.65
C9orf47-202ENST00000375850 KYAT1Q16773 422 aa25.34■■□□□ 1.65
C9orf47-202ENST00000375850 PRSS36Q5K4E3 855 aa25.34■■□□□ 1.65
C9orf47-202ENST00000375850 PDZD4Q76G19 769 aaPredicted RBP25.34■■□□□ 1.65
C9orf47-202ENST00000375850 SYT2Q8N9I0 419 aaPredicted RBP25.34■■□□□ 1.65
C9orf47-202ENST00000375850 KCNN1Q92952 543 aa25.34■■□□□ 1.65
C9orf47-202ENST00000375850 CLDN23Q96B33 292 aa25.34■■□□□ 1.65
C9orf47-202ENST00000375850 MMTAG2Q9BU76 263 aaKnown RBP25.34■■□□□ 1.65
C9orf47-202ENST00000375850 AFF4Q9UHB7 1163 aaKnown RBP25.34■■□□□ 1.65
C9orf47-202ENST00000375850 PCDHGA2Q9Y5H1 932 aa25.34■■□□□ 1.65
C9orf47-202ENST00000375850 MYH15Q9Y2K3 1946 aa25.33■■□□□ 1.65
C9orf47-202ENST00000375850 DMDP11532 3685 aa25.33■■□□□ 1.65
C9orf47-202ENST00000375850 CLDN3O15551 220 aa25.33■■□□□ 1.65
C9orf47-202ENST00000375850 SLC26A4O43511 780 aa25.33■■□□□ 1.65
C9orf47-202ENST00000375850 CEBPBP17676 345 aa25.33■■□□□ 1.65
C9orf47-202ENST00000375850 MARCKSP29966 332 aaPredicted RBP25.33■■□□□ 1.65
C9orf47-202ENST00000375850 ARPP19P56211 112 aa25.33■■□□□ 1.65
C9orf47-202ENST00000375850 ATP2C1P98194 919 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms