RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 NUGGCQ68CJ6 796 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 ICA1LQ8NDH6 482 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 LZICQ8WZA0 190 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 MAGEB5Q9BZ81 275 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 EDEM3Q9BZQ6 932 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 COG4Q9H9E3 785 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 KCNQ5Q9NR82 932 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 STMN3Q9NZ72 180 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 SENP1Q9P0U3 644 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 TUBE1Q9UJT0 475 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 PTPN22Q9Y2R2 807 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 PARNO95453 639 aaKnown RBP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 ZBED1O96006 694 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 CCNE1P24864 410 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 AARSP49588 968 aaKnown RBP eCLIP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 PRPF38BQ5VTL8 546 aaKnown RBP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 APPL2Q8NEU8 664 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 CEP95Q96GE4 821 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 MMTAG2Q9BU76 263 aaKnown RBP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 C11orf84Q9BUA3 381 aaPredicted RBP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 EMSYQ7Z589 1322 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 STXBP3O00186 592 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 NFKBIEO00221 500 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 C4BPBP20851 252 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 TECP42680 631 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 MRPS15P82914 257 aaKnown RBP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 CYP27A1Q02318 531 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 TLE2Q04725 743 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 PLD1Q13393 1074 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 MFSD10Q14728 455 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 SNX17Q15036 470 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 C1orf146Q5VVC0 180 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 CAPRIN2Q6IMN6 1127 aaKnown RBP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 OTOP1Q7RTM1 612 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 PPCSQ9HAB8 311 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 HEMK1Q9Y5R4 338 aaPredicted RBP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 BCL9O00512 1426 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 TJP3O95049 919 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 PSMA3P25788 255 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 PPM1AP35813 382 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 CARSP49589 748 aaKnown RBP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 TMPRSS15P98073 1019 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 ADCY1Q08828 1119 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 TERF2Q15554 542 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 AASDHQ4L235 1098 aaPredicted RBP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 IQSEC1Q6DN90 963 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 TRPV6Q9H1D0 765 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 GPR108Q9NPR9 543 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 TBC1D23Q9NUY8 699 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 PPARGC1AQ9UBK2 798 aaKnown RBP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 ANKRD26Q9UPS8 1709 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 FLT1P17948 1338 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 SEC31AO94979 1220 aaKnown RBP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 RAD51Q06609 339 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 PTK2BQ14289 1009 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 UBE2SQ16763 222 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 HEATR6Q6AI08 1181 aaKnown RBP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 OSBPL9Q96SU4 736 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 C10orf88Q9H8K7 445 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 KANSL3Q9P2N6 904 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 RBL2Q08999 1139 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 SLC10A5Q5PT55 438 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 KHDRBS2Q5VWX1 349 aaKnown RBP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 CCDC149Q6ZUS6 474 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 GET4Q7L5D6 327 aaPredicted RBP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 DDX42Q86XP3 938 aaKnown RBP eCLIP6.64□□□□□ -1.35
PTPN3-202ENST00000374541 KIAA2013Q8IYS2 634 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 IL17RAQ96F46 866 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 BTBD6Q96KE9 485 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 PLEKHA4Q9H4M7 779 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 VTA1Q9NP79 307 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 HPCAL4Q9UM19 191 aa6.64□□□□□ -1.35
PTPN3-202ENST00000374541 NWD1Q149M9 1564 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 RNF103-CHMP3A0A140T963 221 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 ASAP2O43150 1006 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 NDUFA10O95299 355 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 SLC10A3P09131 477 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 C21orf59P57076 290 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 ITGA7Q13683 1181 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 TRADDQ15628 312 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 KIF19Q2TAC6 998 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 ITIH5Q86UX2 942 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 CMTR1Q8N1G2 835 aaKnown RBP6.63□□□□□ -1.35
PTPN3-202ENST00000374541 TTC39CQ8N584 583 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 KCTD6Q8NC69 237 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 CCNYQ8ND76 341 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 YIPF2Q9BWQ6 316 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 SLC39A2Q9NP94 309 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 DDX28Q9NUL7 540 aaKnown RBP6.63□□□□□ -1.35
PTPN3-202ENST00000374541 SLC38A7Q9NVC3 462 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 SAGE1Q9NXZ1 904 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 PYCARDQ9ULZ3 195 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 MRPS23Q9Y3D9 190 aaKnown RBP6.63□□□□□ -1.35
PTPN3-202ENST00000374541 PNMA6AP0CW24 399 aaPredicted RBP6.63□□□□□ -1.35
PTPN3-202ENST00000374541 SOX5P35711 763 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 DACT2Q5SW24 774 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 NAA35Q5VZE5 725 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 SARM1Q6SZW1 724 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 TDRD5Q8NAT2 981 aaKnown RBP6.63□□□□□ -1.35
PTPN3-202ENST00000374541 MRPS26Q9BYN8 205 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms