RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CNOT8Q9UFF9 292 aaKnown RBP14.91□□□□□ -0.02
HMGCL-203ENST00000374490 LOC285556D6RIA3 1793 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 FSCN2O14926 492 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 ATP2A1O14983 1001 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 EXTL3O43909 919 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 FKTNO75072 461 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 ECEL1O95672 775 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 PYGMP11217 842 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 KCNA2P16389 499 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 MARCKSL1P49006 195 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 MAGOHP61326 146 aaKnown RBP14.9□□□□□ -0.02
HMGCL-203ENST00000374490 PSMD6Q15008 389 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 SKIDA1Q1XH10 827 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 WDR44Q5JSH3 913 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 C6orf118Q5T5N4 469 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 SPRYD7Q5W111 196 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 SMYD5Q6GMV2 418 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 SLC39A4Q6P5W5 647 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 ERO1BQ86YB8 467 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 GLG1Q92896 1179 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 SLC10A4Q96EP9 437 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 CFHR5Q9BXR6 569 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 JPH1Q9HDC5 661 aaPredicted RBP14.9□□□□□ -0.02
HMGCL-203ENST00000374490 HOXC10Q9NYD6 342 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 ARHGAP28Q9P2N2 729 aa14.9□□□□□ -0.02
HMGCL-203ENST00000374490 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.9□□□□□ -0.02
HMGCL-203ENST00000374490 C5orf60A6NFR6 353 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 MANSC4A6NHS7 340 aaPredicted RBP14.89□□□□□ -0.03
HMGCL-203ENST00000374490 HNRNPDLO14979 420 aaKnown RBP14.89□□□□□ -0.03
HMGCL-203ENST00000374490 AGTP01019 485 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 RARGP13631 454 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 MAPK4P31152 587 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 RPL21P46778 160 aaKnown RBP14.89□□□□□ -0.03
HMGCL-203ENST00000374490 INHBEP58166 350 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 CLDN10P78369 228 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 PTP4A2Q12974 167 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 XKR3Q5GH77 459 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 SNRNP48Q6IEG0 339 aaKnown RBP14.89□□□□□ -0.03
HMGCL-203ENST00000374490 FBXO46Q6PJ61 603 aaPredicted RBP14.89□□□□□ -0.03
HMGCL-203ENST00000374490 C15orf39Q6ZRI6 1047 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 TRMT10CQ7L0Y3 403 aaKnown RBP14.89□□□□□ -0.03
HMGCL-203ENST00000374490 REPS2Q8NFH8 660 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 FBXO25Q8TCJ0 367 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 GRK7Q8WTQ7 553 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 PSPC1Q8WXF1 523 aaKnown RBP14.89□□□□□ -0.03
HMGCL-203ENST00000374490 ART4Q93070 314 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 CYFIP2Q96F07 1278 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 OTUD5Q96G74 571 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 CEP89Q96ST8 783 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 SH2D3AQ9BRG2 576 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 KIFC3Q9BVG8 833 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 RABEP2Q9H5N1 569 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 EFCC1Q9HA90 598 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 CYP26B1Q9NR63 512 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 WHRNQ9P202 907 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 SLC9A2Q9UBY0 812 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 PCDHB2Q9Y5E7 798 aa14.89□□□□□ -0.03
HMGCL-203ENST00000374490 ATMINO43313 823 aaPredicted RBP14.88□□□□□ -0.03
HMGCL-203ENST00000374490 ZNF862O60290 1169 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 PIGRP01833 764 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 RARAP10276 462 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 KRT5P13647 590 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 COPB2P35606 906 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 LIG4P49917 911 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 PRKCEQ02156 737 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 CAV1Q03135 178 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 STRN3Q13033 797 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 CALCOCO2Q13137 446 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 SIX1Q15475 284 aaPredicted RBP14.88□□□□□ -0.03
HMGCL-203ENST00000374490 SLFN12LQ6IEE8 588 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 TTC27Q6P3X3 843 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 GADL1Q6ZQY3 521 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 MICALL1Q8N3F8 863 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 P3H4Q92791 437 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 WNK4Q96J92 1243 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 TEX13BQ9BXU2 312 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 ROPN1BQ9BZX4 212 aaPredicted RBP14.88□□□□□ -0.03
HMGCL-203ENST00000374490 POLR3FQ9H1D9 316 aaPredicted RBP14.88□□□□□ -0.03
HMGCL-203ENST00000374490 EPB41L4BQ9H329 900 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 ROPN1Q9HAT0 212 aaPredicted RBP14.88□□□□□ -0.03
HMGCL-203ENST00000374490 PPANQ9NQ55 473 aaKnown RBP14.88□□□□□ -0.03
HMGCL-203ENST00000374490 TOPORSQ9NS56 1045 aaPredicted RBP14.88□□□□□ -0.03
HMGCL-203ENST00000374490 HOMER3Q9NSC5 361 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 TMEM51Q9NW97 253 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 SEPT9Q9UHD8 586 aaPredicted RBP14.88□□□□□ -0.03
HMGCL-203ENST00000374490 ADAMTS5Q9UNA0 930 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 STYXL1Q9Y6J8 313 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 SPDYE5A6NIY4 337 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 FSBPO95073 299 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 LDHAP00338 332 aaKnown RBP14.88□□□□□ -0.03
HMGCL-203ENST00000374490 DLATP10515 647 aaKnown RBP14.88□□□□□ -0.03
HMGCL-203ENST00000374490 UNGP13051 313 aaPredicted RBP14.88□□□□□ -0.03
HMGCL-203ENST00000374490 PLCB4Q15147 1175 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 LIN9Q5TKA1 542 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 SWSAP1Q6NVH7 229 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 AADACL2Q6P093 401 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.88□□□□□ -0.03
HMGCL-203ENST00000374490 MCOLN2Q8IZK6 566 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
HMGCL-203ENST00000374490 FNBP1Q96RU3 617 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms