RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 ZNF746Q6NUN9 644 aaPredicted RBP11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 COG4Q9H9E3 785 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 SELENONQ9NZV5 590 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 ZFP69BQ9UJL9 534 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 SPATA31A5Q5VU36 1347 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 SPATA31A7Q8IWB4 1347 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 TTC26A0AVF1 554 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 ARHGAP10A1A4S6 786 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 SUPT3HO75486 399 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 RHOBTB3O94955 611 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 APOA4P06727 396 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 CTSHP09668 335 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 ATXN8OSP0DMR3 200 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 SLC15A2Q16348 729 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 NBPF9Q3BBW0 867 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 LCA5Q86VQ0 697 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 TRIML2Q8N7C3 387 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 RBBP8NLQ8NC74 664 aaPredicted RBP11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 SPATA16Q9BXB7 569 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 TTC7AQ9ULT0 858 aaPredicted RBP11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 PCDHB2Q9Y5E7 798 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 A0A087WWV3 80 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 KCNA1Q09470 495 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 UCMAQ8WVF2 138 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 NAF1Q96HR8 494 aaKnown RBP11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 CHAMP1Q96JM3 812 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 NIF3L1Q9GZT8 377 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 WWP1Q9H0M0 922 aa11.68□□□□□ -0.54
PHACTR4-202ENST00000373839 KPNA6O60684 536 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 EGFRP00533 1210 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 MCF2P10911 925 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 FMO5P49326 533 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 HARS2P49590 506 aaKnown RBP11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 TAF6P49848 677 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 CLCN6P51797 869 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 PPP4CP60510 307 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 ZNF484Q5JVG2 852 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 GNASQ5JWF2 1037 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 ANKRD40Q6AI12 368 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 ING2Q9H160 280 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 MROH8Q9H579 483 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 TMEM8AQ9HCN3 771 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 RGL1Q9NZL6 768 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 C17orf102A2RUQ5 167 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 EXTL3O43909 919 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 BRAFP15056 766 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 HIBCHQ6NVY1 386 aaPredicted RBP11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 PGBD3Q8N328 593 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 STX19Q8N4C7 294 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 TMEM143Q96AN5 459 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 GJB4Q9NTQ9 266 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 FBXO2Q9UK22 296 aaPredicted RBP11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 ADGRG1Q9Y653 693 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 PRPF4O43172 522 aaKnown RBP eCLIP11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 CYP26A1O43174 497 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 CELF2O95319 508 aaKnown RBP11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 PDHBP11177 359 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 HMOX2P30519 316 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 BFSP2Q13515 415 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 PCSK9Q8NBP7 692 aaKnown RBP11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 ARRDC4Q8NCT1 418 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 SCHIP1Q9P0W5 487 aaPredicted RBP11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 STOML1Q9UBI4 398 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 SMG5Q9UPR3 1016 aaKnown RBP11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 PCDHB7Q9Y5E2 793 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 CHD1O14646 1710 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 DCDC2CA8MYV0 355 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 GOLGA8TH3BQL2 631 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 EEF2KO00418 725 aaKnown RBP11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 GPR182O15218 404 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 GFAPP14136 432 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 RASA1P20936 1047 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 RPA1P27694 616 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 RBBP7Q16576 425 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 PTPN21Q16825 1174 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 TMCO4Q5TGY1 634 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 PRUNE1Q86TP1 453 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 ARHGEF26Q96DR7 871 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 ZNF668Q96K58 619 aaPredicted RBP11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 SRPK1Q96SB4 655 aaKnown RBP11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 RSAD1Q9HA92 442 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 SRGAP2O75044 1071 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 NDUFS3O75489 264 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 ARSEP51690 589 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 SLC7A14Q8TBB6 771 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 TMEM169Q96HH4 297 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 ELAC2Q9BQ52 826 aaKnown RBP11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 PSD3Q9NYI0 1048 aa11.67□□□□□ -0.54
PHACTR4-202ENST00000373839 TARSL2A2RTX5 802 aaKnown RBP11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 PP2D1A8MPX8 630 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 TADA3O75528 432 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 SUPT20HL2P0C7V6 817 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 ODC1P11926 461 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 AKT1P31749 480 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 PPP2R2AP63151 447 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 SLC18A3Q16572 532 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 ACBD5Q5T8D3 534 aaPredicted RBP11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 ERO1BQ86YB8 467 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 KIF17Q9P2E2 1029 aa11.66□□□□□ -0.54
PHACTR4-202ENST00000373839 AFF4Q9UHB7 1163 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms