RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 KCNMA1Q12791 1236 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 BIRC3Q13489 604 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 NOMO2Q5JPE7 1267 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.1■□□□□ 0.33
TMEM53-204ENST00000372243 ABI1Q8IZP0 508 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 EHBP1Q8NDI1 1231 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 LMO3Q8TAP4 145 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 CXorf38Q8TB03 319 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 URGCPQ8TCY9 931 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 TAS1R2Q8TE23 839 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 HERVK_113Q902F9 699 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 ANP32BQ92688 251 aaKnown RBP17.1■□□□□ 0.33
TMEM53-204ENST00000372243 RAB20Q9NX57 234 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 GCNT4Q9P109 453 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 PLAGL2Q9UPG8 496 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 SIK3Q9Y2K2 1263 aa17.1■□□□□ 0.33
TMEM53-204ENST00000372243 ZC3H11AO75152 810 aaKnown RBP eCLIP17.09■□□□□ 0.33
TMEM53-204ENST00000372243 PHACTR2O75167 634 aa17.09■□□□□ 0.33
TMEM53-204ENST00000372243 LRPAP1P30533 357 aa17.09■□□□□ 0.33
TMEM53-204ENST00000372243 AFF1P51825 1210 aaKnown RBP17.09■□□□□ 0.33
TMEM53-204ENST00000372243 SYCP1Q15431 976 aa17.09■□□□□ 0.33
TMEM53-204ENST00000372243 VSTM4Q8IW00 320 aa17.09■□□□□ 0.33
TMEM53-204ENST00000372243 CASD1Q96PB1 797 aa17.09■□□□□ 0.33
TMEM53-204ENST00000372243 MRPL9Q9BYD2 267 aaKnown RBP17.09■□□□□ 0.33
TMEM53-204ENST00000372243 PLCB1Q9NQ66 1216 aa17.09■□□□□ 0.33
TMEM53-204ENST00000372243 PCDH10Q9P2E7 1040 aa17.09■□□□□ 0.33
TMEM53-204ENST00000372243 DGKIO75912 1065 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 CST3P01034 146 aaPredicted RBP17.08■□□□□ 0.32
TMEM53-204ENST00000372243 HLA-DRAP01903 254 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 ITGB3P05106 788 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 PON1P27169 355 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 RGS19P49795 217 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 DEFB103AP81534 67 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 NCOA4Q13772 614 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 SPECC1LQ69YQ0 1117 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 TRIM65Q6PJ69 517 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 TAF4BQ92750 862 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 C18orf25Q96B23 403 aaPredicted RBP17.08■□□□□ 0.32
TMEM53-204ENST00000372243 IQCDQ96DY2 449 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 FAM84AQ96KN4 292 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 CRACR2AQ9BSW2 395 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 MTIF3Q9H2K0 278 aaKnown RBP17.08■□□□□ 0.32
TMEM53-204ENST00000372243 TUBGCP4Q9UGJ1 667 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 SIX4Q9UIU6 781 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 INPP5FQ9Y2H2 1132 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 DAAM1Q9Y4D1 1078 aa17.08■□□□□ 0.32
TMEM53-204ENST00000372243 FNDC1Q4ZHG4 1894 aaPredicted RBP17.08■□□□□ 0.32
TMEM53-204ENST00000372243 ANO9A1A5B4 782 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 STAU1O95793 577 aaKnown RBP17.07■□□□□ 0.32
TMEM53-204ENST00000372243 POMCP01189 267 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 SLC9A1P19634 815 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 ATICP31939 592 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 PIK3CAP42336 1068 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 RBP5P82980 135 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 SOX4Q06945 474 aaPredicted RBP17.07■□□□□ 0.32
TMEM53-204ENST00000372243 TUSC3Q13454 348 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 TRPC3Q13507 836 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 SGSM1Q2NKQ1 1148 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 FIGNQ5HY92 759 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 LRRC52Q8N7C0 313 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 PHOSPHO2Q8TCD6 241 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 SEMA4DQ92854 862 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 ZNF689Q96CS4 500 aaPredicted RBP17.07■□□□□ 0.32
TMEM53-204ENST00000372243 UROC1Q96N76 676 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 NUP58Q9BVL2 599 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 INTS2Q9H0H0 1204 aaKnown RBP17.07■□□□□ 0.32
TMEM53-204ENST00000372243 VRTNQ9H8Y1 702 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 TBC1D13Q9NVG8 400 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 PTPRSQ13332 1948 aa17.07■□□□□ 0.32
TMEM53-204ENST00000372243 ZBBXA8MT70 800 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 PIRO00625 290 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 UPP2O95045 317 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 ASS1P00966 412 aaKnown RBP17.06■□□□□ 0.32
TMEM53-204ENST00000372243 RPL9P32969 192 aaKnown RBP17.06■□□□□ 0.32
TMEM53-204ENST00000372243 DSC1Q08554 894 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 RASIP1Q5U651 963 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 C9orf57Q5W0N0 161 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 DPY19L2P1Q6NXN4 242 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 CCDC150Q8NCX0 1101 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 DDX27Q96GQ7 796 aaKnown RBP17.06■□□□□ 0.32
TMEM53-204ENST00000372243 FAXDC2Q96IV6 333 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 SLC9A7Q96T83 725 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 IMPG2Q9BZV3 1241 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 RC3H2Q9HBD1 1191 aaKnown RBP17.06■□□□□ 0.32
TMEM53-204ENST00000372243 FBXL5Q9UKA1 691 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 R3HCC1Q9Y3T6 440 aaKnown RBP17.06■□□□□ 0.32
TMEM53-204ENST00000372243 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.06■□□□□ 0.32
TMEM53-204ENST00000372243 KRT19P08727 400 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 RFX1P22670 979 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 POLR2BP30876 1174 aaKnown RBP17.06■□□□□ 0.32
TMEM53-204ENST00000372243 PNPLA4P41247 253 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 MAGEA10P43363 369 aaPredicted RBP17.06■□□□□ 0.32
TMEM53-204ENST00000372243 GUCY2FP51841 1108 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 WDR44Q5JSH3 913 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 NEK11Q8NG66 645 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 PCMTD1Q96MG8 357 aaPredicted RBP17.06■□□□□ 0.32
TMEM53-204ENST00000372243 XYLT2Q9H1B5 865 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 SIX2Q9NPC8 291 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 APEX2Q9UBZ4 518 aa17.06■□□□□ 0.32
TMEM53-204ENST00000372243 AGAP1Q9UPQ3 857 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms