RNA–Protein interactions for RNA: ENST00000372097.9

GTF3C5-202, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-202ENST00000372097 YIPF3Q9GZM5 350 aa20.46■□□□□ 0.87
GTF3C5-202ENST00000372097 ENO4A6NNW6 628 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 PMM2O15305 246 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 ECE2O60344 883 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 CMPK2Q5EBM0 449 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 DACT2Q5SW24 774 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 RGS9BPQ6ZS82 235 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 ZSWIM2Q8NEG5 633 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 TBC1D10AQ9BXI6 508 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 SCN9AQ15858 1988 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 EIF4E1BA6NMX2 242 aaKnown RBP20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 K7ENM7 598 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 GRIN3BO60391 1043 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 ATP4AP20648 1035 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 MXI1P50539 228 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 TMED2Q15363 201 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 RBM26Q5T8P6 1007 aaKnown RBP20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 STRIP1Q5VSL9 837 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 ACAD10Q6JQN1 1059 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 TRABD2AQ86V40 505 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 C12orf56Q8IXR9 622 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 RIBC1Q8N443 379 aaPredicted RBP20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 TMEM206Q9H813 350 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 SLCO1B3Q9NPD5 702 aa20.45■□□□□ 0.86
GTF3C5-202ENST00000372097 IKQ13123 557 aaPredicted RBP20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 DDX1Q92499 740 aaKnown RBP20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 NUDCD1Q96RS6 583 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 ANAPC7Q9UJX3 599 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 SIPA1L1O43166 1804 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 DPPA5A6NC42 116 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 GAS7O60861 476 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 SPAG7O75391 227 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 DCTN3O75935 186 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 NDUFB10O96000 172 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 ABHD2P08910 425 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 ATP6V1C1P21283 382 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 GCAP28676 217 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 MAPK4P31152 587 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 MFAP3P55082 362 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 XXYLT1Q8NBI6 393 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 GMCL1Q96IK5 515 aa20.44■□□□□ 0.86
GTF3C5-202ENST00000372097 A0A1W2PRG0 241 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 TRAFD1O14545 582 aaPredicted RBP20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 CENPCQ03188 943 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 LONP2Q86WA8 852 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 BBOF1Q8ND07 529 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 SPDYE1Q8NFV5 336 aaPredicted RBP20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 ASAP3Q8TDY4 903 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 SEMA4DQ92854 862 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 UBN1Q9NPG3 1134 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 HSPBP1Q9NZL4 362 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 ARHGEF35A5YM69 484 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 PRPF4O43172 522 aaKnown RBP eCLIP20.43■□□□□ 0.866e-6■■□□□ 11.6
GTF3C5-202ENST00000372097 EDF1O60869 148 aaKnown RBP20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 UPP2O95045 317 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 SLC18A1P54219 525 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 KLF1Q13351 362 aaPredicted RBP20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 WASHC2DQ5SRD0 308 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.43■□□□□ 0.869e-13■■□□□ 13.7
GTF3C5-202ENST00000372097 CCDC89Q8N998 374 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 GMCL1P1Q8NEA9 526 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 DDX27Q96GQ7 796 aaKnown RBP20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 SH3GL3Q99963 347 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 LXNQ9BS40 222 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 IDI2Q9BXS1 227 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 UNC45AQ9H3U1 944 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 TDRD3Q9H7E2 651 aaKnown RBP20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 GRID1Q9ULK0 1009 aa20.43■□□□□ 0.86
GTF3C5-202ENST00000372097 EPHB2P29323 1055 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 ALDH3A1P30838 453 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 MAGEA4P43358 317 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 CTCFP49711 727 aaPredicted RBP20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 INHBEP58166 350 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 NR1H3Q13133 447 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 SPARCL1Q14515 664 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 PDK4Q16654 411 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 IZUMO3Q5VZ72 239 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 HELQQ8TDG4 1101 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 ABLIM1O14639 778 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 CHRNA5P30532 468 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 PCK1P35558 622 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 CYP4F22Q6NT55 531 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 TATDN1Q6P1N9 297 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 SH3TC2Q8TF17 1288 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 C10orf82Q8WW14 230 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 ACCSQ96QU6 501 aa20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 RBM15Q96T37 977 aaKnown RBP eCLIP20.42■□□□□ 0.86
GTF3C5-202ENST00000372097 GSTTP1A0A1W2PQM5 241 aa20.41■□□□□ 0.86
GTF3C5-202ENST00000372097 H0YIN7 160 aa20.41■□□□□ 0.86
GTF3C5-202ENST00000372097 PLSCR1O15162 318 aa20.41■□□□□ 0.86
GTF3C5-202ENST00000372097 FESP07332 822 aa20.41■□□□□ 0.86
GTF3C5-202ENST00000372097 PTDSS1P48651 473 aaKnown RBP20.41■□□□□ 0.86
GTF3C5-202ENST00000372097 RASSF2P50749 326 aa20.41■□□□□ 0.86
GTF3C5-202ENST00000372097 MRPS35P82673 323 aaKnown RBP20.41■□□□□ 0.86
GTF3C5-202ENST00000372097 AOC3Q16853 763 aa20.41■□□□□ 0.86
GTF3C5-202ENST00000372097 SPDYAQ5MJ70 313 aa20.41■□□□□ 0.86
GTF3C5-202ENST00000372097 ZNF449Q6P9G9 518 aa20.41■□□□□ 0.86
GTF3C5-202ENST00000372097 B3GNT9Q6UX72 402 aa20.41■□□□□ 0.86
GTF3C5-202ENST00000372097 ZNF365Q70YC5 407 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms