RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 TSPAN17Q96FV3 270 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 PLEKHA8Q96JA3 519 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 AGAP3Q96P47 875 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 LXNQ9BS40 222 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 BATF3Q9NR55 127 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 AIM2O14862 343 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 MOCS2O96007 188 aaPredicted RBP13.07□□□□□ -0.32
HCFC1-202ENST00000369984 NUP62P37198 522 aaPredicted RBP13.07□□□□□ -0.32
HCFC1-202ENST00000369984 SLC1A1P43005 524 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 CYLC2Q14093 348 aaPredicted RBP13.07□□□□□ -0.32
HCFC1-202ENST00000369984 TOB2Q14106 344 aaPredicted RBP13.07□□□□□ -0.32
HCFC1-202ENST00000369984 KIZQ2M2Z5 673 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 RCSD1Q6JBY9 416 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 RGL1Q9NZL6 768 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 SOX11P35716 441 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 TRPM8Q7Z2W7 1104 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 SEC16BQ96JE7 1060 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 FOPNLQ96NB1 174 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 CCDC134Q9H6E4 229 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 DCDC2Q9UHG0 476 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 MYH9P35579 1960 aaKnown RBP13.07□□□□□ -0.32
HCFC1-202ENST00000369984 ATP7BP35670 1465 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 USP17L15C9J2P7 530 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 USP17L13C9JLJ4 530 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 USP17L11C9JVI0 530 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 USP17L18D6R9N7 530 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 USP17L22D6RA61 530 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 USP17L17D6RBQ6 530 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 USP17L19D6RCP7 530 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 USP17L20D6RJB6 530 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 DLGAP3O95886 979 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 CDC27P30260 824 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 CAPZA2P47755 286 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 USP17L24Q0WX57 530 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 USP17L6PQ6QN14 398 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 TMC5Q6UXY8 1006 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 RCOR2Q8IZ40 523 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 TTC39CQ8N584 583 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 PTPRN2Q92932 1015 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 CCT7Q99832 543 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 LRRC1Q9BTT6 524 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 YIPF2Q9BWQ6 316 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 ABT1Q9ULW3 272 aaKnown RBP13.07□□□□□ -0.32
HCFC1-202ENST00000369984 ADGRG1Q9Y653 693 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 MYH8P13535 1937 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 ADGRL2O95490 1459 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 TEX28O15482 410 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 FKBP9O95302 570 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 AGTP01019 485 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 E4F1Q66K89 784 aaPredicted RBP13.07□□□□□ -0.32
HCFC1-202ENST00000369984 FKBP9P1Q75LS8 142 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 FGD2Q7Z6J4 655 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 AGGF1Q8N302 714 aaeCLIP13.07□□□□□ -0.32
HCFC1-202ENST00000369984 TBC1D19Q8N5T2 526 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 SCN3BQ9NY72 215 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 PSMC3IPQ9P2W1 217 aaPredicted RBP13.07□□□□□ -0.32
HCFC1-202ENST00000369984 EIF3HO15372 352 aaKnown RBP eCLIP13.07□□□□□ -0.322e-7■■□□□ 12.2
HCFC1-202ENST00000369984 TOMM70O94826 608 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 FRMD5Q7Z6J6 570 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 GPD1LQ8N335 351 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 ARAP3Q8WWN8 1544 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 FAM47DPA6NHR8 397 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 SESN2P58004 480 aaPredicted RBP13.07□□□□□ -0.32
HCFC1-202ENST00000369984 SRLQ86TD4 932 aa13.07□□□□□ -0.32
HCFC1-202ENST00000369984 FMR1NBQ8N0W7 255 aaPredicted RBP13.07□□□□□ -0.32
HCFC1-202ENST00000369984 MYH11P35749 1972 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 PHF2O75151 1096 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 PLA2G4AP47712 749 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 BYSLQ13895 437 aaKnown RBP13.06□□□□□ -0.32
HCFC1-202ENST00000369984 CDH24Q86UP0 819 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 SLC35G2Q8TBE7 412 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 MTERF3Q96E29 417 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 PCDHB8Q9UN66 801 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 RALAP11233 206 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 CCND1P24385 295 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 SERPINB3P29508 390 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 QARSP47897 775 aaKnown RBP13.06□□□□□ -0.32
HCFC1-202ENST00000369984 STX3Q13277 289 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 TTC39BQ5VTQ0 682 aaPredicted RBP13.06□□□□□ -0.32
HCFC1-202ENST00000369984 KIF12Q96FN5 646 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 VPS50Q96JG6 964 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 DDX50Q9BQ39 737 aaKnown RBP13.06□□□□□ -0.32
HCFC1-202ENST00000369984 MYH7P12883 1935 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 SFNP31947 248 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 SULT1E1P49888 294 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 ACTR2P61160 394 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 ZNF200P98182 395 aaPredicted RBP13.06□□□□□ -0.32
HCFC1-202ENST00000369984 SLC10A4Q96EP9 437 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 PIDD1Q9HB75 910 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 SUPT3HB4E1H0 165 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 CAND2O75155 1236 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 FAM20AQ96MK3 541 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 EIF2AK1Q9BQI3 630 aaKnown RBP13.06□□□□□ -0.32
HCFC1-202ENST00000369984 RANBP17Q9H2T7 1088 aaKnown RBP13.06□□□□□ -0.32
HCFC1-202ENST00000369984 TASP1Q9H6P5 420 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 LY9Q9HBG7 655 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 PCMTD2Q9NV79 361 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 KLHL2O95198 593 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 SCP2P22307 547 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 PLIN5Q00G26 463 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms