RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 MAPTP10636 758 aaKnown RBP9.59□□□□□ -0.87
TPM3-213ENST00000368545 ATP1A3P13637 1013 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 EDNRBP24530 442 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 CCNE1P24864 410 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 ICAM3P32942 547 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 STX17P56962 302 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 TNP2Q05952 138 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 STK4Q13043 487 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 CTTNQ14247 550 aaKnown RBP9.59□□□□□ -0.87
TPM3-213ENST00000368545 LRRC14Q15048 493 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 FAM26FQ5R3K3 315 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 MRPL14Q6P1L8 145 aaKnown RBP9.59□□□□□ -0.87
TPM3-213ENST00000368545 EEPD1Q7L9B9 569 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 PLEKHH3Q7Z736 793 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 C8orf48Q96LL4 319 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 SPATA9Q9BWV2 254 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 XPO4Q9C0E2 1151 aaKnown RBP9.59□□□□□ -0.87
TPM3-213ENST00000368545 BHMT2Q9H2M3 363 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 PRDM12Q9H4Q4 367 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 SLC28A3Q9HAS3 691 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 TXNRD2Q9NNW7 524 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 PRDM5Q9NQX1 630 aaPredicted RBP9.59□□□□□ -0.87
TPM3-213ENST00000368545 PHF24Q9UPV7 400 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 PCDHGC4Q9Y5F7 938 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 DOCK5Q9H7D0 1870 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 PLXNA1Q9UIW2 1896 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 DCDC2CA8MYV0 355 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 ZBTB42B2RXF5 422 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 DDX39AO00148 427 aaKnown RBP9.59□□□□□ -0.87
TPM3-213ENST00000368545 DKC1O60832 514 aaKnown RBP eCLIP9.59□□□□□ -0.87
TPM3-213ENST00000368545 TBCAO75347 108 aaKnown RBP9.59□□□□□ -0.87
TPM3-213ENST00000368545 LYPLA2O95372 231 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 B3GALT4O96024 378 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 FCER1AP12319 257 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 NRLP54845 237 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 PSMC6P62333 389 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 KCTD2Q14681 263 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 ZSCAN30Q86W11 494 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 FAM133AQ8N9E0 248 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 SPC24Q8NBT2 197 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 KIAA0895Q8NCT3 520 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 P2RX5Q93086 422 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 MMP19Q99542 508 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 TM9SF2Q99805 663 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 THAP9Q9H5L6 903 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 SLC39A2Q9NP94 309 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 PCDHA11Q9Y5I1 949 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 ARID2Q68CP9 1835 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 MYH9P35579 1960 aaKnown RBP9.58□□□□□ -0.88
TPM3-213ENST00000368545 KCNA2P16389 499 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 QARSP47897 775 aaKnown RBP9.58□□□□□ -0.88
TPM3-213ENST00000368545 GSDMDP57764 484 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 CNTN2Q02246 1040 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 LRRC63Q05C16 580 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 PCDH1Q08174 1060 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 TTI2Q6NXR4 508 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 FIGNL1Q6PIW4 674 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 ADAMTSL4Q6UY14 1074 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 BMP8AQ7Z5Y6 402 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 FAM114A1Q8IWE2 563 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 TMEM199Q8N511 208 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 PPM1EQ8WY54 764 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 CAAP1Q9H8G2 361 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 JPH1Q9HDC5 661 aaPredicted RBP9.58□□□□□ -0.88
TPM3-213ENST00000368545 SAMSN1Q9NSI8 373 aaKnown RBP9.58□□□□□ -0.88
TPM3-213ENST00000368545 DBR1Q9UK59 544 aaKnown RBP9.58□□□□□ -0.88
TPM3-213ENST00000368545 ODF2LQ9ULJ1 636 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 ZKSCAN5Q9Y2L8 839 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 ZNF236Q9UL36 1845 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 ATP9AO75110 1047 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 FGFR1OPO95684 399 aaKnown RBP9.58□□□□□ -0.88
TPM3-213ENST00000368545 GAP43P17677 238 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 CYP2B6P20813 491 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 MSNP26038 577 aaKnown RBP9.58□□□□□ -0.88
TPM3-213ENST00000368545 ARNTP27540 789 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 PSMC5P62195 406 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 NFKB2Q00653 900 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 UBAP2LQ14157 1087 aaKnown RBP9.58□□□□□ -0.88
TPM3-213ENST00000368545 GIT2Q14161 759 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 FILIP1LQ4L180 1135 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 HERC4Q5GLZ8 1057 aaPredicted RBP9.58□□□□□ -0.88
TPM3-213ENST00000368545 PERM1Q5SV97 790 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 OLFML2BQ68BL8 750 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 HGSNATQ68CP4 663 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 RINT1Q6NUQ1 792 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 C4orf19Q8IY42 314 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 MYOCDQ8IZQ8 938 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 ZSCAN1Q8NBB4 408 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 BSNDQ8WZ55 320 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 REEP2Q9BRK0 252 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 SEL1LQ9UBV2 794 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 SLC9A2Q9UBY0 812 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 PCDHA10Q9Y5I2 948 aa9.58□□□□□ -0.88
TPM3-213ENST00000368545 ASTN1O14525 1302 aa9.57□□□□□ -0.88
TPM3-213ENST00000368545 DNAJC25-GNG10A0A024R161 153 aa9.57□□□□□ -0.88
TPM3-213ENST00000368545 ARHGEF35A5YM69 484 aa9.57□□□□□ -0.88
TPM3-213ENST00000368545 PEX10O60683 326 aa9.57□□□□□ -0.88
TPM3-213ENST00000368545 TGFB3P10600 412 aa9.57□□□□□ -0.88
TPM3-213ENST00000368545 EEF1GP26641 437 aaKnown RBP9.57□□□□□ -0.88
TPM3-213ENST00000368545 ZNF252P-AS1Q0IIN9 211 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms