RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 C8orf33Q9H7E9 229 aaPredicted RBP16.27■□□□□ 0.2
VAMP4-202ENST00000367740 PPME1Q9Y570 386 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 HEPACAM2A8MVW5 462 aa16.26■□□□□ 0.19
VAMP4-202ENST00000367740 EML1O00423 815 aa16.26■□□□□ 0.19
VAMP4-202ENST00000367740 HYAL3O43820 417 aaPredicted RBP16.26■□□□□ 0.19
VAMP4-202ENST00000367740 AKAP3O75969 853 aa16.26■□□□□ 0.19
VAMP4-202ENST00000367740 IGHDP01880 384 aa16.26■□□□□ 0.19
VAMP4-202ENST00000367740 CSRP1P21291 193 aaKnown RBP16.26■□□□□ 0.19
VAMP4-202ENST00000367740 GNA11P29992 359 aa16.26■□□□□ 0.19
VAMP4-202ENST00000367740 USP11P51784 963 aa16.26■□□□□ 0.19
VAMP4-202ENST00000367740 KPNA1P52294 538 aaPredicted RBP16.26■□□□□ 0.19
VAMP4-202ENST00000367740 ROR1Q01973 937 aa16.26■□□□□ 0.19
VAMP4-202ENST00000367740 NCBP1Q09161 790 aaKnown RBP16.26■□□□□ 0.19
VAMP4-202ENST00000367740 PLK5Q496M5 336 aa16.26■□□□□ 0.19
VAMP4-202ENST00000367740 ZSCAN18Q8TBC5 510 aaPredicted RBP16.26■□□□□ 0.19
VAMP4-202ENST00000367740 ETNPPLQ8TBG4 499 aa16.26■□□□□ 0.19
VAMP4-202ENST00000367740 CCDC12Q8WUD4 166 aaPredicted RBP16.26■□□□□ 0.19
VAMP4-202ENST00000367740 TCP11Q8WWU5 503 aa16.26■□□□□ 0.19
VAMP4-202ENST00000367740 DDX27Q96GQ7 796 aaKnown RBP16.26■□□□□ 0.19
VAMP4-202ENST00000367740 CXCL16Q9H2A7 254 aa16.26■□□□□ 0.19
VAMP4-202ENST00000367740 SSUH2Q9Y2M2 353 aa16.26■□□□□ 0.19
VAMP4-202ENST00000367740 BACE2Q9Y5Z0 518 aa16.26■□□□□ 0.19
VAMP4-202ENST00000367740 TDP2O95551 362 aa16.25■□□□□ 0.19
VAMP4-202ENST00000367740 TKTP29401 623 aaKnown RBP16.25■□□□□ 0.19
VAMP4-202ENST00000367740 QARSP47897 775 aaKnown RBP16.25■□□□□ 0.19
VAMP4-202ENST00000367740 PON2Q15165 354 aa16.25■□□□□ 0.19
VAMP4-202ENST00000367740 PDZD3Q86UT5 571 aa16.25■□□□□ 0.19
VAMP4-202ENST00000367740 DUSP15Q9H1R2 295 aaPredicted RBP16.25■□□□□ 0.19
VAMP4-202ENST00000367740 RWDD1Q9H446 243 aaPredicted RBP16.25■□□□□ 0.19
VAMP4-202ENST00000367740 KLK13Q9UKR3 277 aa16.25■□□□□ 0.19
VAMP4-202ENST00000367740 MSRB2Q9Y3D2 182 aa16.25■□□□□ 0.19
VAMP4-202ENST00000367740 GPSM3Q9Y4H4 160 aa16.25■□□□□ 0.19
VAMP4-202ENST00000367740 TRIP11Q15643 1979 aa16.25■□□□□ 0.19
VAMP4-202ENST00000367740 ASCC3Q8N3C0 2202 aaKnown RBP16.25■□□□□ 0.19
VAMP4-202ENST00000367740 ATG2BQ96BY7 2078 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 PRRG1O14668 218 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 CHADO15335 359 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 ABLIM3O94929 683 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 GJA1P17302 382 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 CLCN6P51797 869 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 FCHO2Q0JRZ9 810 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 CAPSQ13938 189 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 SLC8B1Q6J4K2 584 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 RALGPS2Q86X27 583 aaPredicted RBP16.24■□□□□ 0.19
VAMP4-202ENST00000367740 PROSER1Q86XN7 944 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 HS6ST3Q8IZP7 471 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 SYNPOQ8N3V7 929 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 ZNF461Q8TAF7 563 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 BICD2Q8TD16 824 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 TCEANC2Q96MN5 208 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 MTRQ99707 1265 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 XPNPEP1Q9NQW7 623 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 INSL5Q9Y5Q6 135 aa16.24■□□□□ 0.19
VAMP4-202ENST00000367740 A0A1B0GUA9 196 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 BCLAF3A2AJT9 711 aaKnown RBP16.23■□□□□ 0.19
VAMP4-202ENST00000367740 TMEM189-UBE2V1I3L0A0 370 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 SEC24AO95486 1093 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 CAVIN2O95810 425 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 THP07101 528 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 ADD1P35611 737 aaKnown RBP16.23■□□□□ 0.19
VAMP4-202ENST00000367740 CREB5Q02930 508 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 POU5F1BQ06416 359 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 MXD4Q14582 209 aaPredicted RBP16.23■□□□□ 0.19
VAMP4-202ENST00000367740 CYP4A22Q5TCH4 519 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 C19orf48Q6RUI8 117 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 ANKS3Q6ZW76 656 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 YAF2Q8IY57 180 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 TCEAL8Q8IYN2 117 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 DEFB124Q8NES8 71 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 TTC8Q8TAM2 541 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 FAM200AQ8TCP9 573 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 ASAP3Q8TDY4 903 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 TBCKQ8TEA7 893 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 LSG1Q9H089 658 aaKnown RBP16.23■□□□□ 0.19
VAMP4-202ENST00000367740 TMEM9BQ9NQ34 198 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 SNTG2Q9NY99 539 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 KIAA1549LQ6ZVL6 1849 aa16.23■□□□□ 0.19
VAMP4-202ENST00000367740 CYP3A7-CYP3A51PA0A087WV96 503 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 KLF18A0A0U1RQI7 1052 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 I3L4J1 428 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 CDX4O14627 284 aaPredicted RBP16.22■□□□□ 0.19
VAMP4-202ENST00000367740 CAPNS1P04632 268 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 PRKCBP05771 671 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 ATF2P15336 505 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 CYP3A7P24462 503 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 YWHABP31946 246 aaKnown RBP16.22■□□□□ 0.19
VAMP4-202ENST00000367740 ELF1P32519 619 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 EPHA5P54756 1037 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 TEAD2Q15562 447 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 CREB3L3Q68CJ9 461 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 CD300LGQ6UXG3 332 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 BBC3Q96PG8 261 aaPredicted RBP16.22■□□□□ 0.19
VAMP4-202ENST00000367740 CYP4F11Q9HBI6 524 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 GTSE1Q9NYZ3 720 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 CEP72Q9P209 647 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 VAV3Q9UKW4 847 aa16.22■□□□□ 0.19
VAMP4-202ENST00000367740 MYO16Q9Y6X6 1858 aa16.21■□□□□ 0.19
VAMP4-202ENST00000367740 DKC1O60832 514 aaKnown RBP eCLIP16.21■□□□□ 0.19
VAMP4-202ENST00000367740 RECQL4O94761 1208 aa16.21■□□□□ 0.19
VAMP4-202ENST00000367740 MYL4P12829 197 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms