RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 CIITAP33076 1130 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 SLC8A3P57103 927 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 NOP14P78316 857 aaKnown RBP8.69□□□□□ -1.02
CD46-208ENST00000367042 MXRA7P84157 204 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 GPS1Q13098 491 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 RIPK1Q13546 671 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 FYB2Q5VWT5 728 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 C15orf52Q6ZUT6 534 aaKnown RBP8.69□□□□□ -1.02
CD46-208ENST00000367042 SCYL3Q8IZE3 742 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 FBXL13Q8NEE6 735 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 LMO3Q8TAP4 145 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 MORC4Q8TE76 937 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 MAIP1Q8WWC4 291 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 CRAMP1Q96RY5 1269 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 FAM213AQ9BRX8 229 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 SYT11Q9BT88 431 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 LRRC19Q9H756 370 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 UBN1Q9NPG3 1134 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 DMAC2Q9NW81 257 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 DENND3A2RUS2 1198 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 ATP2A1O14983 1001 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 SMIM24O75264 130 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 UNC5CO95185 931 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 CYP3A4P08684 503 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 ALAS1P13196 640 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 GYS1P13807 737 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 ETS1P14921 441 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 MTFR1Q15390 333 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 WDR44Q5JSH3 913 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 ACAD10Q6JQN1 1059 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 DAW1Q8N136 415 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 ARMC2Q8NEN0 867 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.69□□□□□ -1.02
CD46-208ENST00000367042 OLIG1Q8TAK6 271 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 PLEKHO2Q8TD55 490 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 SPIRE2Q8WWL2 714 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 MCUR1Q96AQ8 359 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 NAF1Q96HR8 494 aaKnown RBP8.69□□□□□ -1.02
CD46-208ENST00000367042 L3MBTL3Q96JM7 780 aaPredicted RBP8.69□□□□□ -1.02
CD46-208ENST00000367042 CFAP57Q96MR6 1250 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 FIZ1Q96SL8 496 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 OSBPL8Q9BZF1 889 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 DCLK3Q9C098 648 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 KIAA1683Q9H0B3 1180 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 BATF3Q9NR55 127 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 SPATS2LQ9NUQ6 558 aaKnown RBP8.69□□□□□ -1.02
CD46-208ENST00000367042 RAB20Q9NX57 234 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 TMOD2Q9NZR1 351 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 ZFP69BQ9UJL9 534 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 CCPG1Q9ULG6 757 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 MRPL11Q9Y3B7 192 aaKnown RBP8.69□□□□□ -1.02
CD46-208ENST00000367042 NEU2Q9Y3R4 380 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 ZHX2Q9Y6X8 837 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 UBR3Q6ZT12 1888 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 CFAP69A5D8W1 941 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 ENTPD5O75356 428 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 BANF1O75531 89 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 TAC1P20366 129 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 MAN1A1P33908 653 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 ARSEP51690 589 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 SARNPP82979 210 aaKnown RBP8.69□□□□□ -1.02
CD46-208ENST00000367042 PKN2Q16513 984 aaKnown RBP8.69□□□□□ -1.02
CD46-208ENST00000367042 ATP13A4Q4VNC1 1196 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 ZNF394Q53GI3 561 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 LIN9Q5TKA1 542 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 APBB1IPQ7Z5R6 666 aaPredicted RBP8.69□□□□□ -1.02
CD46-208ENST00000367042 SIAH1Q8IUQ4 282 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 FAM71AQ8IYT1 594 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 DTX3LQ8TDB6 740 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 ZBTB10Q96DT7 871 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 FAXDC2Q96IV6 333 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 HERPUD2Q9BSE4 406 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 CCDC134Q9H6E4 229 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 NKX1-2Q9UD57 310 aaPredicted RBP8.69□□□□□ -1.02
CD46-208ENST00000367042 FAM198AQ9UFP1 575 aa8.69□□□□□ -1.02
CD46-208ENST00000367042 NOCTQ9UK39 431 aaKnown RBP8.69□□□□□ -1.02
CD46-208ENST00000367042 ZMYND8Q9ULU4 1186 aaPredicted RBP8.69□□□□□ -1.02
CD46-208ENST00000367042 SCAF8Q9UPN6 1271 aaKnown RBP8.69□□□□□ -1.02
CD46-208ENST00000367042 LUC7L3O95232 432 aaKnown RBP8.68□□□□□ -1.02
CD46-208ENST00000367042 P4HBP07237 508 aaKnown RBP8.68□□□□□ -1.02
CD46-208ENST00000367042 CNGA1P29973 690 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 YWHABP31946 246 aaKnown RBP8.68□□□□□ -1.02
CD46-208ENST00000367042 HSPA1LP34931 641 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 MGAT5Q09328 741 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 MKRN3Q13064 507 aaKnown RBP8.68□□□□□ -1.02
CD46-208ENST00000367042 DMP1Q13316 513 aaPredicted RBP8.68□□□□□ -1.02
CD46-208ENST00000367042 PPP2R5CQ13362 524 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 STAT4Q14765 748 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 TSNAXIP1Q2TAA8 658 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 TAF1BQ53T94 588 aaPredicted RBP8.68□□□□□ -1.02
CD46-208ENST00000367042 PCNX4Q63HM2 1172 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 SPOPLQ6IQ16 392 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 DCUN1D2Q6PH85 259 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 USP37Q86T82 979 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 VPS52Q8N1B4 723 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 CRYGNQ8WXF5 182 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 TMEM109Q9BVC6 243 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 C12orf65Q9H3J6 166 aaKnown RBP8.68□□□□□ -1.02
CD46-208ENST00000367042 KMT5AQ9NQR1 393 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 ARHGEF3Q9NR81 526 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms