RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 ZNRF3Q9ULT6 936 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 NTSR2O95665 410 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 NDUFB10O96000 172 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 RASA1P20936 1047 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 ACTR2P61160 394 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 NFIXQ14938 502 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 TRPM8Q7Z2W7 1104 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 RHPN2Q8IUC4 686 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 ACTRT1Q8TDG2 376 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 PAPD7Q5XG87 772 aaKnown RBP12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 STYK1Q6J9G0 422 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 PRMT7Q9NVM4 692 aaPredicted RBP12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 LRRIQ3A6PVS8 624 aaPredicted RBP12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 ELF1P32519 619 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 GPR162Q16538 588 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 IFT43Q96FT9 208 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 SORBS3O60504 671 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 CASP2P42575 452 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 GUCY1A3Q02108 690 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 PDK1Q15118 436 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 KDM7AQ6ZMT4 941 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 EPB41L4AQ9HCS5 686 aaPredicted RBP12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 H2AFXP16104 143 aaPredicted RBP12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 IL10P22301 178 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 OCA2Q04671 838 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 ADCY1Q08828 1119 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 KLHDC7AQ5VTJ3 777 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 C4orf50Q6ZRC1 276 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 COL23A1Q86Y22 540 aaPredicted RBP12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 KIAA1257Q9ULG3 409 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 SALL3Q9BXA9 1300 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 STAT5BP51692 787 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 ITIH4Q14624 930 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 AASDHQ4L235 1098 aaPredicted RBP12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 JAMLQ86YT9 394 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 PABPC3Q9H361 631 aaKnown RBP12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 FOXN1O15353 648 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 NCK2O43639 380 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 STIP1P31948 543 aaKnown RBP12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 CDKAL1Q5VV42 579 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 CD302Q8IX05 232 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 TSSK1BQ9BXA7 367 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 TDRD3Q9H7E2 651 aaKnown RBP12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 BLOC1S6Q9UL45 172 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 CYP2C8P10632 490 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 TMEM132DQ14C87 1099 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 RASSF3Q86WH2 238 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 RNF25Q96BH1 459 aaPredicted RBP12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 KDM4CQ9H3R0 1056 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 MAPK7Q13164 816 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 LINC00523Q86TU6 105 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 ZC3H7BQ9UGR2 993 aaKnown RBP12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 LSM8O95777 96 aaKnown RBP12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 MYLK4Q86YV6 388 aaPredicted RBP12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 NIF3L1Q9GZT8 377 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 RBM12Q9NTZ6 932 aaKnown RBP12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 C11orf63Q6NUN7 778 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 KATNAL1Q9BW62 490 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 AGPAT5Q9NUQ2 364 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 HOXC6P09630 235 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 MARK3P27448 753 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 PNPLA4P41247 253 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 HSPA13P48723 471 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 SPDYCQ5MJ68 293 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 DAB2IPQ5VWQ8 1189 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 C16orf89Q6UX73 402 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 CHST13Q8NET6 341 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 PBXIP1Q96AQ6 731 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 NEU2Q9Y3R4 380 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 INPP5AQ14642 412 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 DCLK2Q8N568 766 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 TNIP2Q8NFZ5 429 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 TPCN2Q8NHX9 752 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 MMP19Q99542 508 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 MAD2L2Q9UI95 211 aa12.66□□□□□ -0.38
CDC42BPA-203ENST00000366766 CDH2P19022 906 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 GPRASP2Q96D09 838 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 PCDHB8Q9UN66 801 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 PRAMEP78395 509 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 ZNF200P98182 395 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 IL17RAQ96F46 866 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 SLC25A27O95847 323 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 MAPTP10636 758 aaKnown RBP12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 RAD9BQ6WBX8 426 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 OSBPL8Q9BZF1 889 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 VCPKMTQ9H867 229 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 NAGPAQ9UK23 515 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 AP1B1Q10567 949 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 CAPRIN2Q6IMN6 1127 aaKnown RBP12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 FAM151AQ8WW52 585 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 SALL1Q9NSC2 1324 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 C3orf70A6NLC5 250 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 BOLA3Q53S33 107 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 CENPPQ6IPU0 288 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 SYNE4Q8N205 404 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 XPO6Q96QU8 1125 aaKnown RBP12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 O00370 1275 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 CFLARO15519 480 aa12.65□□□□□ -0.38
CDC42BPA-203ENST00000366766 CNGA3Q16281 694 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms